| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_1947 |
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| Symbol | CPD1 |
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| ID | 7201298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 693015 |
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| End bp | 694559 |
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| Gene Length | 1545 bp |
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| Protein Length | 515 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | cyclobutane pyrimidine dimer 1 |
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| Protein accession | XP_002180488 |
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| Protein GI | 219119456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000588882 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTGA TCTGGCTTAA GCGGGACTTG CGCCTTACAG ATCACGGCCC ACTGGCGGCT
GTGGCCCAAC GCAAAGACCG AGATGTCTGT ATACTCTACT TGTACGAACC CGATCAGCTG
GCAGAACCAA GCGTTCACGG ATCCCACGTA CTATTTGCTA ATGAAGGGCT AGTAGACTTA
GATACGAAGT TGTCGAATCT TCGAAGGTTG TCGTCTGGCC AAAACGCTGC GGCCAGCAAA
AGCTTTGGTT CGTTGACAGT CTGCCACTGC GAGGTAATCC AGGCTCTACA AGCTATTCAT
GCGCAAAAGA AAATAGCGAG GCTACTGGCA CATATGGAGA CCGGACACAT GCGGTCCTAT
GCTCGCGATA AACGAGTTCG AAAATGGTGT AGGGATAGAA AAATACCTTT CGTGGAGTTG
CCTCAAACGG GTGTGTCACG ATGCCTTACG AATCGCGACG ACTTTCATCG CAATCTGCAA
ATGTTTTTGA AGAAGAAACA GTATCGCACA CCAACAGCCC TCGAATGCAA CATAGTCATC
GATTTAGAAT TACCAGGAAG AAGCATGGAG CCCTTGTTCG CCGAGTTGAT CGAGATTCCT
TTAGAGCAGA GAGTCGACCG TACAGAACGC CAGCAAGGAG GGGAAACAAC AGCATTGGAA
ATCCTCCGGT CTTTTCTTTA CCATCGAGGA GTAGGATTTT CAAAAGGAAT TTCGTCACCC
AATTCTTCGT GGACGTCATG CAGTCGGCTT TCCCCGTACC TTACATGGGG CCAAATTTCC
TTAAGACACG TAGTACAAGC ACTCCAGGAA CGTCAAGCTC AGCTGAAGAC GCAGAAATGT
CGATCTGATG ATCGCTGGTT GCGCTCCTTT ACTGCGTTCT CATCTCGCGT GCACTGGCGA
TCGCACTTTA TTCAAAAGCT CGAGTCGGAA CCGGAAATGG AACAACGCGA CGTAAATGCA
GCCTTTCAAC CACTCCGTCG ACAACCCGGC GATTGGAATG AATGCTACTA TCAGGCTTGG
TCAACTGGAA ACACAGGCTA TCCAATGATG GACGCATGTA TGCGCTGTTT GCACCGACAT
GGTTGGGTCA ACTTTCGAAT GCGGGCCATG CTGGTTTCAT TCGCAAGCTA CAATTTGTGG
CTGGATTGGC ATCGGTTCGC TCCCCACTTG GCTCGCGTTT TTCTAGACTA TGAACCGGGA
ATTCATTATC CGCAAATTCA AATGCAGTCG GGTACAACAG GTATTAACGC CTTGCGCTGT
TATTCTGTAA CAAAACAAGG AAAAGAGCAC GATCCTCGAG GAATTTTCGT TCGCAAGTAC
ATTCCTGAAC TCCAGTCCGT ACCAAATGAC TACATTCACG AGCCTTGGAA GATGTCTAAA
TCTATGCAGG CCAAGTGCGG CGTTCACATT GGCGAACACT ATCCCGCACC TATTGTGAAT
GAACAGGAAA CAGCGAAAAG CGCCAAAGAA CGCATCGCTG CCGTCCGTCG AAGAAACGAA
ACTCAGGAGG CCTCACGAAA GGTTTACGAA AAGCATGGGA GCCGT
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| Protein sequence | MDVIWLKRDL RLTDHGPLAA VAQRKDRDVC ILYLYEPDQL AEPSVHGSHV LFANEGLVDL
DTKLSNLRRL SSGQNAAASK SFGSLTVCHC EVIQALQAIH AQKKIARLLA HMETGHMRSY
ARDKRVRKWC RDRKIPFVEL PQTGVSRCLT NRDDFHRNLQ MFLKKKQYRT PTALECNIVI
DLELPGRSME PLFAELIEIP LEQRVDRTER QQGGETTALE ILRSFLYHRG VGFSKGISSP
NSSWTSCSRL SPYLTWGQIS LRHVVQALQE RQAQLKTQKC RSDDRWLRSF TAFSSRVHWR
SHFIQKLESE PEMEQRDVNA AFQPLRRQPG DWNECYYQAW STGNTGYPMM DACMRCLHRH
GWVNFRMRAM LVSFASYNLW LDWHRFAPHL ARVFLDYEPG IHYPQIQMQS GTTGINALRC
YSVTKQGKEH DPRGIFVRKY IPELQSVPND YIHEPWKMSK SMQAKCGVHI GEHYPAPIVN
EQETAKSAKE RIAAVRRRNE TQEASRKVYE KHGSR
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