Gene PHATRDRAFT_12940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12940 
Symbol 
ID7201487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp820721 
End bp821320 
Gene Length600 bp 
Protein Length200 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180713 
Protein GI219119925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTTGCTACC AAGATCGTTG GGTCTGCGTC AACAAACCCG CGGGTATGTC AACGCATCGT 
AGCGGAGGCA ATAGAAGCAA CCAGTTCGTT GTCTCGACAC TTCTCAAACG CCAACTGTCA
CGCAAAGTTT TTCCGGTTCA TCGACTTGAT CATCGGACCT CTGGAGCGCT TTTGTTTGCC
TTCGACTCAG AAATGTGTGC TTCCCTTCAC GATGCACTTC GTGAACAGTC TGCCCGCAAA
ACGTATGTCT GCCTTGTTCG AGGCTTTTGG GACAATTTCT TCGAGAGTGA TACCGCAACT
GTGGACAAGG CTCTCACCGT AGACGGCACC AAACGCAGCG CTACTACGGT ATTTACCAAA
TTGGCCAGTA CCATTATTCT TAACAACTCA GCTTACGGTG AAAAGAACGT GCCAATTTCG
TGTAGCCTCA TCTTGGCTGT TCCAACCACC GGTCGAACCC ATCAAATTCG ACGTCACGCC
AGTGCTATGG GAATGCCTGT ACTGGGCGAT ACACAACACG GAGAAACAAA AGTCAACCGA
TGGTGGAGAC AGAAAAGGGG GCTTGACAGG CTAGCGCTGC ACTGTCTATC TCTGAACTTG
 
Protein sequence
LCYQDRWVCV NKPAGMSTHR SGGNRSNQFV VSTLLKRQLS RKVFPVHRLD HRTSGALLFA 
FDSEMCASLH DALREQSARK TYVCLVRGFW DNFFESDTAT VDKALTVDGT KRSATTVFTK
LASTIILNNS AYGEKNVPIS CSLILAVPTT GRTHQIRRHA SAMGMPVLGD TQHGETKVNR
WWRQKRGLDR LALHCLSLNL