Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12927 |
Symbol | |
ID | 7201154 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 485036 |
End bp | 486764 |
Gene Length | 1729 bp |
Protein Length | 526 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180444 |
Protein GI | 219119364 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCCAAATCA GCGAGCTGAC AGCGTTGACA TCCTTAAATT ATAGCGCTAA CTTTCTCAAT GAAAGTCTTC CTACGCAGAT TGGGCTCATG ACGACCTTGC TCGAATTTTC CGCTTTCTTC AACTTCCAAA TAGGAGAAAT ACCGACAGAG ATCGGAAACC TGGTGAACCT GACAACGCTA CGCCTTGACG AGAATGTGTT CACAGGAGCA ATTCCAACTG AACTCGCCAA CATATTTGCC CTCGGTAAGT ACCAATGAAT GCCCAAAGTT TTTCCGGTAA TTTTTTTTCT CACAGTAGCT GATTCTTATC CTTAGAACGC CTTTATCTAA ATAACAATGC GCTGAATGGA ACAATACCGA ACATGTTGGG TGATTTGAAT AATCTACAGG AGTTCTACTT TAATAACAAT GAGCTTGCGG GTAAAATTCC TTCGCAATTG GAAAGAATGA GCAATCTGAC GGATTTCGTC GGTTTCCTTA ATTTTTTAAC GGGGTCCATC CCCGAAGTTT TCGGTTCGCT TTCAAGTCTA CAGCGCTTAG ACGTGAGTGA TAACTTTCTG GCCGGAACAC TGCCTGCAGC AATCTTTTCG AGCGAAACTT TGCAGGAATT AGACTTAGCA CGAAACACAT TTCTTGGTGG CATCCCTCTA GTTGTGATCA ACCAGTCGAG TCTCGAAATA ATTGATCTGC AGGAAAATCA ACTGACGGGA ACGCTTTCCG AAGCGGTAGG TTCTTTGACT GCTTTGAAAA GCCTTTTGTT GAACAACAAC TTCCTTTCGG GCATTGTCCC TGCCGTCCCA GCAGCACTTG AACAATTACA TCTAGGGACA AATTTCTTCT TTGGCGCAAT TCCATCTGAG ATTGGTAGTA CAACAGGCTT GAAACAGCTC AGACTAGACG CAAATACCTT CAATGGAACC ATCCCTGTCG AGATCTCCCT GCTCGGAGAC CTGGAAGTTC TAAATATTTC TGGCAATTCA TTTTTTTCAG GTCTCCCTAG TCAACTTGGA GCATTATCAA GTCTACGAGA ACTCGATGTC AGTGCGTCAG GATTAAACGG AACCATACCA GCAGCTTTTT TCTCACTTTC GCTACTTGAA AAGCTGTCCT TGGCAGACAA CGCCTTAGAG GGAACGATTC CTACTCCAGC GCGATCAGCA TCTCCTACGC TTCTTGAGAT GCGCCTCAAC AACAACAAAT TAAGAGGATC TATACCAGCT ACAATTGCTG GGTCAACAAA CCTGAGTAAG TAAGAAATTG TGAATACAAG TGCATTGTTG AGATCGGAAC TAACAATGTC ACGATGTTAA ATTCTGTCCT TTCAGCTTTG TTGGATCTAA GTGGCAACGA GCTGACGGGG GATATCCCAG TAGAAATTTA CGACGTGGTG GAGCTAAGAG ATCTGAATTT TGGAGCCAAT CTTTTATTTG GCCCCATTCC TACGCAGTTT GGGGCATTGA CAAAGCTTGA GAGGCTAGTT ATTGGACCAA ACTTCTTCTC AGGCACTATC CCGAGTGAAA TAGGAGAGCT ATTGGAACTA GTAGAATTTC GAATGCCTAC AAATTTCTTC AACGGAACAA TTCCGACAGA GTTTGGGAAA CTCACCAAAC TTACAGTTTT GGATTTATCG AACAATTTGG TAGACGGTAC TGTTCCTTCT CAGCTTGGCA ATATCACAAC TCTGCGAGAA GTGCTACTAG GGGTGACGGG TCTATCAGGC TCTGTCCCG
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Protein sequence | FQISELTALT SLNYSANFLN ESLPTQIGLM TTLLEFSAFF NFQIGEIPTE IGNLVNLTTL RLDENVFTGA IPTELANIFA LERLYLNNNA LNGTIPNMLG DLNNLQEFYF NNNELAGKIP SQLERMSNLT DFVGFLNFLT GSIPEVFGSL SSLQRLDVSD NFLAGTLPAA IFSSETLQEL DLARNTFLGG IPLVVINQSS LEIIDLQENQ LTGTLSEAVG SLTALKSLLL NNNFLSGIVP AVPAALEQLH LGTNFFFGAI PSEIGSTTGL KQLRLDANTF NGTIPVEISL LGDLEVLNIS GNSFFSGLPS QLGALSSLRE LDVSASGLNG TIPAAFFSLS LLEKLSLADN ALEGTIPTPA RSASPTLLEM RLNNNKLRGS IPATIAGSTN LTLLDLSGNE LTGDIPVEIY DVVELRDLNF GANLLFGPIP TQFGALTKLE RLVIGPNFFS GTIPSEIGEL LELVEFRMPT NFFNGTIPTE FGKLTKLTVL DLSNNLVDGT VPSQLGNITT LREVLLGVTG LSGSVP
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