| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_12896 |
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| Symbol | GrpE |
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| ID | 7201295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | - |
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| Start bp | 675536 |
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| End bp | 677158 |
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| Gene Length | 1623 bp |
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| Protein Length | 525 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | GrpE protein, HSP90 cofactor, chloroplast targeted |
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| Protein accession | XP_002180686 |
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| Protein GI | 219119870 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAGCAACTTA AATCCGATTA CACCCAGTCG AGGCCGTATC CACACGGCAT ATTCAAGAAT
ATCTTCGAAC CCGAGTTTCT GAAATCTGTA TTGACCGAAG TAAAGTGTAA TTCGCAAGTA
AATTTCAAAG AGTCTGATCT GTTCCGTGTC TATCAATCAA TCGATCTGGC AAACGTGGCC
ATCGACGATC ATTCAAATCA GGAAAAACTC CCAAATACCA TTCAGCTGCG CCAATTCTTG
TACAGCGATG GATGGCGTCA TTTGATTGAA GACGTTAGCG GCCTAGAACG CGGGACTCTC
AATGAGAAGG TGGATTGTGC CTTTAATTGC CATACGACAG GGTGTCATTT GCTCTGTCAC
GATGATGTGA TTGGCACCCG TAAGATATCT TACATTCTGT ATTTGACTGA TGAAGGCTGG
AAAGAGGAAG AGGGTGGTGC ATTAGAGCTA TATGATAGTG TCGAATATGG AAAAGGAGAG
GCCAAGCAGC GACTGCCCAA TTGTGTACCG TCCAAGACCA TTCTCCCACT GTTCAACCAC
ATGGGCTTTT TCGAGGTTCG ACCAGGATTT TCTTTCCATG CGGTACAGGA AGTTTTTGGA
GATCGCCCAA GGCTATCACT TCAGGGCTGG TATCACACCG ACAAACCACC GAAAGGTATT
GGAAAAGCGA CCTTAGAGCG TCTCAAGGCG ACATCAGATC ATTTCGAATC GCCATTCACC
CCAGTTGAGA TACCGCCGCA CTCATTAATG AGTGCCACAA CCGATGTTTG TATCTTGTTC
AACGAAGATC TGAATTTCCT GAGAAAATAC GTTCATCCTG TTTACCTAAA TCCGGACGCA
ATCCGTGAGA TTAATCAAAG ATTTGAGGAA GACTCGAGTG TCCAGTTGCG CAACTTTTTG
CTACCGCACT GGGTCGACAA GCTTAGGAAA GCTACCGAGG AAGAGAAACA GGAAAGTTCC
GACGGGTACA CCGCGGGGGT AACGAAAGAT TGGAAATTGG TGGGACCCTC ACACAAACAG
CGCTACCTCC AATACACAAA TCGGATTTCT GACGATTCCG CCGATCTTGT AGAAACGGGA
GAAATTCTCG CACATTTGCA GCATGTGTTG CAGTCCTCCG TCTTTTTGCG TTTTTTGCTG
TCAATTACGT CCTTGTCTCC GACTTCCTAC CGTGGACACG TTCGTCGGTT TCGTCCCGGT
CTGGATTATA CAGTCGCCCA TTACGGACTA TTACAGCTCA CGTCGGTTTT GGACGCGACT
TTGTGTTTCG TGGCCGGGCA AGGTGAGGAT GTTGCCGAAA CGGATGATCC TTTGGAAGCG
GATGTAGCTT GGCAGTCTGG CGATGTAGGT GCATTTGAGT GTTACATTGC AGCAGATGAT
GAAGAGGGTA GCGAAGCAGC TGCGGATGAG TACCACGAGG ATGACGACAC CGGATTGTTA
AGTGTGTCCG CAAGCAATAA TACCCTATCG TTGGTTTACC GTGACCCTGG TACATTACGA
TTCATCAAAT ACGTGGGATC ACAAGCGCCG AGTTCGCGTT GGGACATCTC AATGGAGTAT
CAAGTAACAG AAGAGGCGGG GGATTGTGCC AACATCGAGG TGGAAAAAAA TCTATCGGCT
TGA
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| Protein sequence | EQLKSDYTQS RPYPHGIFKN IFEPEFLKSV LTEVKCNSQV NFKESDLFRV YQSIDLANVA
IDDHSNQEKL PNTIQLRQFL YSDGWRHLIE DVSGLERGTL NEKVDCAFNC HTTGCHLLCH
DDVIGTRKIS YILYLTDEGW KEEEGGALEL YDSVEYGKGE AKQRLPNCVP SKTILPLFNH
MGFFEVRPGF SFHAVQEVFG DRPRLSLQGW YHTDKPPKGI GKATLERLKA TSDHFESPFT
PVEIPPHSLM SATTDVCILF NEDLNFLRKY VHPVYLNPDA IREINQRFEE DSSVQLRNFL
LPHWVDKLRK ATEEEKQESS DGYTAGVTKD WKLVGPSHKQ RYLQYTNRIS DDSADLVETG
EILAHLQHVL QSSVFLRFLL SITSLSPTSY RGHVRRFRPG LDYTVAHYGL LQLTSVLDAT
LCFVAGQGED VAETDDPLEA DVAWQSGDVG AFECYIAADD EEGSEAAADE YHEDDDTGLL
SVSASNNTLS LVYRDPGTLR FIKYVGSQAP SSRWDISMEY QVTEE
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