Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12887 |
Symbol | |
ID | 7201454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 340317 |
End bp | 340889 |
Gene Length | 573 bp |
Protein Length | 191 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180617 |
Protein GI | 219119727 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCTACATGT GCTTCGATGA AGAAGATTCC GAAGAAAACC CAATGATCAC TCCCTGTAAA TGTAGCGGAG ATACCAAGTA CGTCCATGTG GATTGTCTCC GCAAGTGGCA TACGGCGGAA GCCGACAACC AGATCTGCTT CCTCTCGTCT GTCGACGCCA CCTGTTCCGT CTGCAAAAGT ACCTTCAAGT CCGATTTTAA GCTCAAGGAT GGACGTCACC TTAAGCTATT CAAGTCCTCC TTGGAGCCTC CATACGTTTC GCTGCTGGTG GCCACCAAGC ACGAAATGGC CCAGCGGCTT TTCAACACGC GATTCCAGCT ATCCTTTAGC ACCCTGATGA AGCCCGATGG CAAAAACGCT ACACGCCCGC TACTTTTGGG GCGCTCTTCT GGATCCGACA TGGTCTTGGA TTATCGCACG GTCTCTGCTC GCCACGCCTC TATTCGCTTT AAGAATGGGG AATTCATCTT TACGGATGGC GGCTCGTCCA ACGGCTCCTA TCTTTATTTA CGGAAGCCCT TGGAACTGTC CCCATCCCAG GCCGTACAGT TTCGTCTGGG GCGTTCGATG ATC
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Protein sequence | CYMCFDEEDS EENPMITPCK CSGDTKYVHV DCLRKWHTAE ADNQICFLSS VDATCSVCKS TFKSDFKLKD GRHLKLFKSS LEPPYVSLLV ATKHEMAQRL FNTRFQLSFS TLMKPDGKNA TRPLLLGRSS GSDMVLDYRT VSARHASIRF KNGEFIFTDG GSSNGSYLYL RKPLELSPSQ AVQFRLGRSM I
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