Gene PHATRDRAFT_12783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12783 
SymbolCDC20_1 
ID7201423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp153178 
End bp154269 
Gene Length1092 bp 
Protein Length363 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180582 
Protein GI219119654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCG ATCCGAGTAC AAACTCGTCG GTTGCGAAGA AAGTGCTGCG GAAGGTACCG 
GGAGCTCCAA CGCGCGTCTT GGACGCACCC GACATTGTGG ACGACTACTA TCTCAATTTG
GTGAGTTGGG GAAAGGATAA CGTTTTGGCC GTTGCGTTGG CACAGAGCGT CTATTTGTGG
CATGCCGGCA CGGGGGTTAT TCAGCATCTT GTCACCGTGG ATGCCGGCAG TGACTACGTT
ACCAGTGTCA GCTGGTGTCC CACACCAGGA CAGACTCGAC ACGTTGCGGT CGGCACAAAC
GCAGCCGTCG TACACATTTA CGACGGAATT GCTTTGAAGA AAATCAGAAC ACTTCATGGG
CACACAGGCC GAATATCGTC GTTGGGATGG AACCAACACT GGTTGAGTTC AGGCGCACGA
GACTCACAAA TCATCAATCA TGACGTACGC GTAGCACGCA ACATTGTGAG TCGGTATATG
GCACACGAGC AGGAAGTATG CGGTCTAAAA TGGAATGAGG ACGGGTCTAT GCTAGCCAGT
GGCGGGAACG AGAATTTTTT GTGTATATGG GATGCTGCCA TGTCGGGATC CCGGCAGCGT
CTTTCGAGTA CGAACGAAAT TTCTCCTCGC TTAATTCTTA AGCAGCACAA GGCAGCTGTC
AAAGCACTGG ACTGGTGTCC TTTTTATCGT GGGCTTTTGG CAAGTGGGGG AGGGACGGCG
GATCGTTGCA TTAAATTTTG GAACTCTTCG TCGGGCGCCA TACTCAATAG CATCGACACG
GGCAGCCAAG TTTGTTCCAT TGTCTGGAGC AAACACCAGC GAGAACTGTG TTCGTCGCAT
GGCTATTCAG AGAATCAGCT CATTTTATGG AAATATCCAT CCATGACTAA AATCAAGGAA
CTCAAAGGAC ATACCGCACG CGTATTGAAT ATGGAAATGA GCCCGGACGG AGCGTCGGTG
GTGTCGGCTG CTGCCGACGA GACTCTGCGG TTCTGGAACG TGTTTGGCAA TCCGTCAACG
TACCGAAACG GTTCATCGGG AGCATCCATT TTTGGGGAGG ATATATCATT TGGTGTGCCA
CCCATCCGAT AA
 
Protein sequence
MDLDPSTNSS VAKKVLRKVP GAPTRVLDAP DIVDDYYLNL VSWGKDNVLA VALAQSVYLW 
HAGTGVIQHL VTVDAGSDYV TSVSWCPTPG QTRHVAVGTN AAVVHIYDGI ALKKIRTLHG
HTGRISSLGW NQHWLSSGAR DSQIINHDVR VARNIVSRYM AHEQEVCGLK WNEDGSMLAS
GGNENFLCIW DAAMSGSRQR LSSTNEISPR LILKQHKAAV KALDWCPFYR GLLASGGGTA
DRCIKFWNSS SGAILNSIDT GSQVCSIVWS KHQRELCSSH GYSENQLILW KYPSMTKIKE
LKGHTARVLN MEMSPDGASV VSAAADETLR FWNVFGNPST YRNGSSGASI FGEDISFGVP
PIR