Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12783 |
Symbol | CDC20_1 |
ID | 7201423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 153178 |
End bp | 154269 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180582 |
Protein GI | 219119654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG ATCCGAGTAC AAACTCGTCG GTTGCGAAGA AAGTGCTGCG GAAGGTACCG GGAGCTCCAA CGCGCGTCTT GGACGCACCC GACATTGTGG ACGACTACTA TCTCAATTTG GTGAGTTGGG GAAAGGATAA CGTTTTGGCC GTTGCGTTGG CACAGAGCGT CTATTTGTGG CATGCCGGCA CGGGGGTTAT TCAGCATCTT GTCACCGTGG ATGCCGGCAG TGACTACGTT ACCAGTGTCA GCTGGTGTCC CACACCAGGA CAGACTCGAC ACGTTGCGGT CGGCACAAAC GCAGCCGTCG TACACATTTA CGACGGAATT GCTTTGAAGA AAATCAGAAC ACTTCATGGG CACACAGGCC GAATATCGTC GTTGGGATGG AACCAACACT GGTTGAGTTC AGGCGCACGA GACTCACAAA TCATCAATCA TGACGTACGC GTAGCACGCA ACATTGTGAG TCGGTATATG GCACACGAGC AGGAAGTATG CGGTCTAAAA TGGAATGAGG ACGGGTCTAT GCTAGCCAGT GGCGGGAACG AGAATTTTTT GTGTATATGG GATGCTGCCA TGTCGGGATC CCGGCAGCGT CTTTCGAGTA CGAACGAAAT TTCTCCTCGC TTAATTCTTA AGCAGCACAA GGCAGCTGTC AAAGCACTGG ACTGGTGTCC TTTTTATCGT GGGCTTTTGG CAAGTGGGGG AGGGACGGCG GATCGTTGCA TTAAATTTTG GAACTCTTCG TCGGGCGCCA TACTCAATAG CATCGACACG GGCAGCCAAG TTTGTTCCAT TGTCTGGAGC AAACACCAGC GAGAACTGTG TTCGTCGCAT GGCTATTCAG AGAATCAGCT CATTTTATGG AAATATCCAT CCATGACTAA AATCAAGGAA CTCAAAGGAC ATACCGCACG CGTATTGAAT ATGGAAATGA GCCCGGACGG AGCGTCGGTG GTGTCGGCTG CTGCCGACGA GACTCTGCGG TTCTGGAACG TGTTTGGCAA TCCGTCAACG TACCGAAACG GTTCATCGGG AGCATCCATT TTTGGGGAGG ATATATCATT TGGTGTGCCA CCCATCCGAT AA
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Protein sequence | MDLDPSTNSS VAKKVLRKVP GAPTRVLDAP DIVDDYYLNL VSWGKDNVLA VALAQSVYLW HAGTGVIQHL VTVDAGSDYV TSVSWCPTPG QTRHVAVGTN AAVVHIYDGI ALKKIRTLHG HTGRISSLGW NQHWLSSGAR DSQIINHDVR VARNIVSRYM AHEQEVCGLK WNEDGSMLAS GGNENFLCIW DAAMSGSRQR LSSTNEISPR LILKQHKAAV KALDWCPFYR GLLASGGGTA DRCIKFWNSS SGAILNSIDT GSQVCSIVWS KHQRELCSSH GYSENQLILW KYPSMTKIKE LKGHTARVLN MEMSPDGASV VSAAADETLR FWNVFGNPST YRNGSSGASI FGEDISFGVP PIR
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