Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12759 |
Symbol | |
ID | 7201480 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 795349 |
End bp | 796282 |
Gene Length | 934 bp |
Protein Length | 275 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180515 |
Protein GI | 219119512 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.556022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTCGGTGCCG CCTGTACCTT TGGTGGAGTC GTGTGGGCCA CGATGGGGTC CGAAAGTGGC GCCGAATTCT TCGCGGGCTA TTTGATCGAA CAATCCCTTT CGGTGGACAA TCTCTTTGTA TTCTTGCTTC TGTTTGAATA CTTTAAAGTG CCCTTGGCCT TTCAAGATCG TGTTTTAAAC TGGGGTATTT ACGGTGCCAT TGTCATGCGT GGCATCATGA TTGGTTTGGG GGCGGCTGCG CTGGAACAGT ACCACGGGAT ATTACTCGTA TTTGCCGCTA TTCTCGTGTA CGGATCCGGC AAGTTCTTTT GGGGCCTCGT TACAAACGAC GAGGACGACG AAGTCGAGGA AGATCCCGGT GAAAATACCA TTGTCCGCTT CGCCCGCTCT GTGTTTCCGT CCACGGAGGA GTACGACGGC GATCGCTTCT TCACCCAGGT GGATGGCATA CGGAAAGCCA CGCCCTTGTT TGTTTGCATG GTGGCGGTGG AAATCAGTGA TGTCGTGTTT GCCGTGGATA GTATCCCGGC CGTCTTTGGG GTCACGGAAG TACGTCAAAC GTGTGCGGCG AGGGAATATA TTAGACCAGC TTTGTTCATC TCGAGATGGA AATACTAACT CGTATCGAAT CTCTTTTTCT TGTCTTCCCA CCCAGGATCC TATTATTGTG TTTACTTCCA ACCTTTTTGC CATTATGGGA TTGCGTTCGC TGTACACGAT TCTTTCGAAA GCGGCAACGG ACCTCAAGTA CCTGGAACCA GCGGTGGCCC TCGTTCTGGG TTTCATCGGC TGCAAAATGA TTGCCGAATA CTTTGGCTAT GTCATTCCCA CCAACGTGGC GCTTTTGGTA GTGGGTTCTC TGCTCGGCAC GGGCGTTGGC GCGTCCGTCT ACGATAAGCA ACAAAGATTG AACACCAACG AGGAAAAAAC ATAA
|
Protein sequence | VGAACTFGGV VWATMGSESG AEFFAGYLIE QSLSVDNLFV FLLLFEYFKV PLAFQDRVLN WGIYGAIVMR GIMIGLGAAA LEQYHGILLV FAAILVYGSG KFFWGLVTND EDDEVEEDPG ENTIVRFARS VFPSTEEYDG DRFFTQVDGI RKATPLFVCM VAVEISDVVF AVDSIPAVFG VTEDPIIVFT SNLFAIMGLR SLYTILSKAA TDLKYLEPAV ALVLGFIGCK MIAEYFGYVI PTNVALLVVG SLLGTGVGAS VYDKQQRLNT NEEKT
|
| |