Gene PHATRDRAFT_12641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12641 
Symbol 
ID7201523 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011677 
Strand
Start bp48412 
End bp49386 
Gene Length975 bp 
Protein Length249 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180559 
Protein GI219119606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGACG ATTTTGTGTG CGCCCCAGAT TTTGCCGCTG TCTTCGACGG ACATGGCGGC 
AAAGCTGTGA GCGAATACCT TCGTCAAAAT CTATACGCGG AGCTCCAAGC TGCATTACCT
CGAGTAATGG GAGCGCAAAT ATCGGAAACA ACAAAAACTA CCGATGGTGC GGGGCACGAT
TCTACCTCGT CTATCTCGTC AGAGAACCAC ACAATCACCA CCACAATTTC GCATAAGAGA
ACTGAATTAG AGGACCTCAA AGTCGGACCG ACAATTGGGC AATATGAAGA AGCCTTGTGC
CAGGCTCTGT ATAAAGTGGA TAGCAACATC CAGCGCATTA GCCACTGGAG CTTTCAAGGT
AGCACGGCAG TCGCCGTGTG GATGCACGAA GAAAAGATGC CTTCTCCGTC AGGCAAGGAG
TTCTGCAATA CCTTATCCGA TCCAATGATG ATACAATCCA AACGGACCAT TATTGCGGCG
AATATTGGAG ATAGTAGAGC CATTCTCAGC CGTAACGAAA CTGCCATTGA GCTAACTCGT
GACCACAAGC CGAGCGATCC CATCGAACTC GATCGAATTC ACTCGCTCGG CGGGCGCGTT
ATATGGCATG GGCACGTCGA CACACATGGC GACCCTATTC CAGGGACCGG GGTCTACCGT
GTAAATGGAA ACTTGGCACT GTCGAGGGCC ATCGGCGATC GCTCCGAGCG CCCTGCAGTC
ACTGCCGATC CCGACGTTTC CATTTTACCA ATCGATGAAG CAGATGATTT TTTGGTGCTC
GCTACCGATG GCTTGTGGGA TGTTATGACG AGTTCCGATG TTGTAGCCTT CATACATGCG
CTGATTGAAC AAGGGGAGGA TATCGACCGG GACCCAATTG CTGCCATGGT CGTGGAAGAA
GCCATTCGTA GAGGAAGTTA CGACAACATC ACAGTCTTAA TTGTGTGGCT GAATCCGTCC
GCTACTAGTC TATAG
 
Protein sequence
MEDDFVCAPD FAAVFDGHGG KAVSEYLRQN LYAELQAALP RVMGAQISET TKTTDEKMPS 
PSGKEFCNTL SDPMMIQSKR TIIAANIGDS RAILSRNETA IELTRDHKPS DPIELDRIHS
LGGRVIWHGH VDTHGDPIPG TGVYRVNGNL ALSRAIGDRS ERPAVTADPD VSILPIDEAD
DFLVLATDGL WDVMTSSDVV AFIHALIEQG EDIDRDPIAA MVVEEAIRRG SYDNITVLIV
WLNPSATSL