Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12641 |
Symbol | |
ID | 7201523 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 48412 |
End bp | 49386 |
Gene Length | 975 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180559 |
Protein GI | 219119606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGACG ATTTTGTGTG CGCCCCAGAT TTTGCCGCTG TCTTCGACGG ACATGGCGGC AAAGCTGTGA GCGAATACCT TCGTCAAAAT CTATACGCGG AGCTCCAAGC TGCATTACCT CGAGTAATGG GAGCGCAAAT ATCGGAAACA ACAAAAACTA CCGATGGTGC GGGGCACGAT TCTACCTCGT CTATCTCGTC AGAGAACCAC ACAATCACCA CCACAATTTC GCATAAGAGA ACTGAATTAG AGGACCTCAA AGTCGGACCG ACAATTGGGC AATATGAAGA AGCCTTGTGC CAGGCTCTGT ATAAAGTGGA TAGCAACATC CAGCGCATTA GCCACTGGAG CTTTCAAGGT AGCACGGCAG TCGCCGTGTG GATGCACGAA GAAAAGATGC CTTCTCCGTC AGGCAAGGAG TTCTGCAATA CCTTATCCGA TCCAATGATG ATACAATCCA AACGGACCAT TATTGCGGCG AATATTGGAG ATAGTAGAGC CATTCTCAGC CGTAACGAAA CTGCCATTGA GCTAACTCGT GACCACAAGC CGAGCGATCC CATCGAACTC GATCGAATTC ACTCGCTCGG CGGGCGCGTT ATATGGCATG GGCACGTCGA CACACATGGC GACCCTATTC CAGGGACCGG GGTCTACCGT GTAAATGGAA ACTTGGCACT GTCGAGGGCC ATCGGCGATC GCTCCGAGCG CCCTGCAGTC ACTGCCGATC CCGACGTTTC CATTTTACCA ATCGATGAAG CAGATGATTT TTTGGTGCTC GCTACCGATG GCTTGTGGGA TGTTATGACG AGTTCCGATG TTGTAGCCTT CATACATGCG CTGATTGAAC AAGGGGAGGA TATCGACCGG GACCCAATTG CTGCCATGGT CGTGGAAGAA GCCATTCGTA GAGGAAGTTA CGACAACATC ACAGTCTTAA TTGTGTGGCT GAATCCGTCC GCTACTAGTC TATAG
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Protein sequence | MEDDFVCAPD FAAVFDGHGG KAVSEYLRQN LYAELQAALP RVMGAQISET TKTTDEKMPS PSGKEFCNTL SDPMMIQSKR TIIAANIGDS RAILSRNETA IELTRDHKPS DPIELDRIHS LGGRVIWHGH VDTHGDPIPG TGVYRVNGNL ALSRAIGDRS ERPAVTADPD VSILPIDEAD DFLVLATDGL WDVMTSSDVV AFIHALIEQG EDIDRDPIAA MVVEEAIRRG SYDNITVLIV WLNPSATSL
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