Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12562 |
Symbol | |
ID | 7201241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 411497 |
End bp | 412651 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180632 |
Protein GI | 219119758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.637847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGGATTTCG ATGTGAAACG TCAGTGGTTC AAAACTCAAA TGCGTCGACT CAGGCAACAG GCCAGTCGGC GCCACGGCAG TTTGCGCCTT CAGATTCGAC GCAAGTACGT ATTTGAAGAC GCCTACCACC AACTTCGGCT TCGCAATGCT GATGAGATGC GAGGTCGGCT CCAGATTACT TTTAGAAACG AAGAAGGTGT TGACGCCGGA GGTCTTTCTC GGGAGTTTTT CGCGATCCTC GCGAAAGAGA TTTTCAATCC AAACTACGCG CTGTTCACTT CTACCGAAGA TGGATGTACG TTCCAACCCA ACCCGAACAG CAGTATAAAC CCCGACCACT TGAGTTACTT TCGGTTCGTT GGCCGAATTG TTGGCAAAGC TGTATCCGAC GGATACCTCC TGGATGCTCA CTTTACGAGA AGTCTTTACA AGCACATGTT GGGACTGAAG CCGACACATC ACGACATGGA AGCCATTGAC CCTGATTATT ACAAGAATTT AAAGACGATA CTCGAGTACA ACTTGGCAGA CATCGGTCTG GATCTTACGT TTTCTATAGA CGACCACTCT TTTGGACGAA GTCAAGTGAT TGATTTAATC TCAGACGGAA GAAGCGTCGC CGTCACAGAG ACAAATAAGG AGGAATATGT TCGCATGGTT TGTCAACATC GCATGACAAC TGCTATCCAG AGCCAGATAA AAGCCTATCT CGACGGGTTT TACGAGCTAG TGGATGTAGA TCACATCGCC ATCTTTACTG CCAGAGAACT CGAACTGTTG ATTTCAGGGT TGCCAGATAT AGATGTCTTC GATCTAAAGA AGAATACGGA CTATGTTGGA TGGAAAGCCA CTGAAAATGA AATAGAGTGG TTTTGGAACA TTATGATGTC GCTTTCAAGA AACGAGAAGG CGACATTTCT GCAATTTGTT ACGGGAAGTT CCAAGGTCCC TTTGAGCGGA TTCTCCGAGC TTCAAGGCAT GAGAGGCATT CAAAAGTTTA GCATTCACAA AGTCGGCAGA CCTATGGGCT CCCTCATGTC CGCTCACACA TGTTTCAACT CATTAGACCT CCCGCCGTAT AGCAGTGAGG AAGAAATGCG TGAGAAGTTC TTGCTAGCTA TCAACGAAGG TGCCAGCGGC TTCTTGTTTG CTTAG
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Protein sequence | LDFDVKRQWF KTQMRRLRQQ ASRRHGSLRL QIRRKYVFED AYHQLRLRNA DEMRGRLQIT FRNEEGVDAG GLSREFFAIL AKEIFNPNYA LFTSTEDGCT FQPNPNSSIN PDHLSYFRFV GRIVGKAVSD GYLLDAHFTR SLYKHMLGLK PTHHDMEAID PDYYKNLKTI LEYNLADIGL DLTFSIDDHS FGRSQVIDLI SDGRSVAVTE TNKEEYVRMV CQHRMTTAIQ SQIKAYLDGF YELVDVDHIA IFTARELELL ISGLPDIDVF DLKKNTDYVG WKATENEIEW FWNIMMSLSR NEKATFLQFV TGSSKVPLSG FSELQGMRGI QKFSIHKVGR PMGSLMSAHT CFNSLDLPPY SSEEEMREKF LLAINEGASG FLFA
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