Gene PHATRDRAFT_56610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_56610 
Symbol 
ID7200944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp407700 
End bp408524 
Gene Length825 bp 
Protein Length244 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180038 
Protein GI219118535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCGT CCTCTTTCCT ACTGTACAGC ATATTATCCG CAGCTGTAGT TCCATACGCG 
GCATTTGTCG TCGGCGGAGT GACGCCTGGC GGTCGATACC TGCGAACGAT CACGGCGGCA
GTATCCACTG GTACCGGGAC GGATGACTTG CTCCGACCGA GCTACGCAAT CGAGAAGATT
CCGCTGCGCA TTGGTCACGG ATTCGACATT CACCGTATGG CACCCTTGGC CGAAGCTGGA
CAACCCGTCG TGATTGGGGG AGTCGTGATT GATCACCTTC CGCAAAAGTG GACCGATGCC
GAAGGCCGTT ACGTGGAGAA GGGCGGCGTG TACGAGACCG AGCTCGGCGT GGTAGCGCAC
TCTGACGGCG ACGTAATTTA CCACTCAATA GTGGACGCCA TCTTTGGAGC CTTGACGCTG
CCAGATATTG GGCAGGTCTT TCAGGATACG GACCCGCGAT GGAAAGGTTG TGACAGTAGT
AAATTTATGG AACACGCGCA TACCGTCATG GCGGATTATG GATACAAGGT TGGCAACATT
GATGTGACGC TGATATTAGA AAGACCAAAG GTCGCGTCAT TCAAGCCCGC CATGAAAAAG
AATATTGTAA ATTTGCTTCA GACGACTCCG GGACGAGTCA ACATTAAAGC CCGCACACAC
GAACGGGTGG ATTCCGTCGG AGAACTCCGG TCTCTGTCAT GTCACGTTGT CATGACGTTG
GAACTGGACA CGTAAAAGAA GACATCCTAT TTACTCTAGA GAAATCGAAG GCACTGAATG
GTACGGATAT TTAAAAGCAC ATAGCTAGCC AGTCGACAGA AATAG
 
Protein sequence
MKSSSFLLYS ILSAAVVPYA AFVVGGVTPG GRYLRTITAA VSTGTGTDDL LRPSYAIEKI 
PLRIGHGFDI HRMAPLAEAG QPVVIGGVVI DHLPQKWTDA EGRYVEKGGV YETELGVVAH
SDGDVIYHSI VDAIFGALTL PDIGQVFQDT DPRWKGCDSS KFMEHAHTVM ADYGYKVGNI
DVTLILERPK VASFKPAMKK NIVNLLQTTP GRVNIKARTH ERVDSVGELR SLSCHVVMTL
ELDT