Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_56610 |
Symbol | |
ID | 7200944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 407700 |
End bp | 408524 |
Gene Length | 825 bp |
Protein Length | 244 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180038 |
Protein GI | 219118535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCGT CCTCTTTCCT ACTGTACAGC ATATTATCCG CAGCTGTAGT TCCATACGCG GCATTTGTCG TCGGCGGAGT GACGCCTGGC GGTCGATACC TGCGAACGAT CACGGCGGCA GTATCCACTG GTACCGGGAC GGATGACTTG CTCCGACCGA GCTACGCAAT CGAGAAGATT CCGCTGCGCA TTGGTCACGG ATTCGACATT CACCGTATGG CACCCTTGGC CGAAGCTGGA CAACCCGTCG TGATTGGGGG AGTCGTGATT GATCACCTTC CGCAAAAGTG GACCGATGCC GAAGGCCGTT ACGTGGAGAA GGGCGGCGTG TACGAGACCG AGCTCGGCGT GGTAGCGCAC TCTGACGGCG ACGTAATTTA CCACTCAATA GTGGACGCCA TCTTTGGAGC CTTGACGCTG CCAGATATTG GGCAGGTCTT TCAGGATACG GACCCGCGAT GGAAAGGTTG TGACAGTAGT AAATTTATGG AACACGCGCA TACCGTCATG GCGGATTATG GATACAAGGT TGGCAACATT GATGTGACGC TGATATTAGA AAGACCAAAG GTCGCGTCAT TCAAGCCCGC CATGAAAAAG AATATTGTAA ATTTGCTTCA GACGACTCCG GGACGAGTCA ACATTAAAGC CCGCACACAC GAACGGGTGG ATTCCGTCGG AGAACTCCGG TCTCTGTCAT GTCACGTTGT CATGACGTTG GAACTGGACA CGTAAAAGAA GACATCCTAT TTACTCTAGA GAAATCGAAG GCACTGAATG GTACGGATAT TTAAAAGCAC ATAGCTAGCC AGTCGACAGA AATAG
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Protein sequence | MKSSSFLLYS ILSAAVVPYA AFVVGGVTPG GRYLRTITAA VSTGTGTDDL LRPSYAIEKI PLRIGHGFDI HRMAPLAEAG QPVVIGGVVI DHLPQKWTDA EGRYVEKGGV YETELGVVAH SDGDVIYHSI VDAIFGALTL PDIGQVFQDT DPRWKGCDSS KFMEHAHTVM ADYGYKVGNI DVTLILERPK VASFKPAMKK NIVNLLQTTP GRVNIKARTH ERVDSVGELR SLSCHVVMTL ELDT
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