| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56440 |
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| Symbol | hUbi |
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| ID | 7200913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | - |
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| Start bp | 231581 |
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| End bp | 233506 |
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| Gene Length | 1926 bp |
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| Protein Length | 381 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180197 |
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| Protein GI | 219118861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.143287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GATCACGGCT CCCATAAAAA CCATTTTCGG GGAGCCTTTG GAAAAAACAA CAACTAACCA
TGCAGGTAAG CACGATGTGG CTTGGAAATG TTTCCATTAA AGTATTCTTA GTAGTCAGGG
ACATCGTGGC TGGAAAGAGG TCAAGAAAAA GAGTGAAAGC GTGGTGAAAT GAGTGTTCAC
GGACAAACAT GTCGAAAATC AGTCATTTTC TCAAGATGAT ACGATTGGAG AGGAATCGTA
TTGGACGGTT ACTTGATCAC AATGAGTTTT TGGACGTATA GCGTTGTCTG CTGATGCTGA
AAGCGGAATG GAAGCGAATG GTGGAGTGGA AACCACGAAG TGGCTTTCTT TGGTTAGGAA
TTCTGCCGAA TACGATTCTT ACGTATCGTT GGTACTGCTT TCTACGCTTT TTTAGATTTT
CGTCAAGACT TTAACTGGAA AGACCATTAC GCTCGATGTC GAGCCTTCGG ACACTATTGA
CAACGTCAAG ACTAAGATCC AGGACAAGGA AGGAATTCCT CCCGATCAGC AGCGTCTCAT
TTTTGCCGGA AAGCAGCTCG AGGACGGACG TACTCTCTCG GACTACAACA TCCAGAAGGA
GTCCACGTTG CACTTGGTGC TTCGTCTCCG AGGAGGAATG CAGATTTTTG TCAAGACCTT
GACTGGAAAG ACCATCACGC TCGATGTCGA GCCTTCGGAC ACTATTGACA ACGTCAAGAC
TAAGATCCAG GACAAGGAAG GAATTCCTCC GGATCAGCAG CGTCTCATTT TTGCCGGAAA
GCAGCTCGAG GACGGACGTA CTCTCTCGGA CTACAACATC CAGAAGGAGT CCACGTTGCA
CTTGGTGCTT CGTCTCCGAG GAGGAATGCA GATTTTTGTC AAGACCTTGA CTGGAAAGAC
CATCACGCTC GATGTCGAGC CTTCGGACAC TATTGACAAC GTCAAGACTA AGATCCAGGA
CAAGGAAGGA ATTCCTCCGG ATCAGCAGCG TCTCATTTTT GCCGGAAAGC AGCTCGAGGA
CGGACGTACT CTCTCGGACT ACAACATCCA GAAGGAGTCC ACGTTGCACT TGGTGCTTCG
TCTCCGAGGA GGAATGCAGA TTTTTGTCAA GACCTTGACT GGAAAGACCA TCACGCTCGA
TGTCGAGCCT TCGGACACTA TTGACAACGT CAAGACTAAG ATCCAGGACA AGGAAGGAAT
TCCTCCGGAT CAGCAGCGTC TCATTTTTGC CGGAAAGCAG CTCGAGGACG GACGTACTCT
CTCGGACTAC AACATCCAGA AGGAGTCCAC GTTGCACTTG GTGCTTCGTC TCCGAGGAGG
AATGCAGATT TTTGTCAAGA CCTTGACTGG AAAGACCATT ACGCTCGATG TCGAGCCTTC
GGATACTATT GACAACGTCA AGACTAAGAT CCAGGACAAG GAAGGAATTC CTCCCGATCA
GCAGCGTCTC ATTTTTGCCG GAAAGCAGCT CGAGGACGGA CGTACTCTCT CGGACTACAA
CATCCAGAAG GAGTCCACGT TGCACTTGGT GCTTCGTCTC CGAGGAGGAA TGCAGATTTT
TGTCAAGACC TTGACTGGAA AGACCATTAC GCTCGATGTC GAGCCTTCGG ACACTATTGA
CAACGTCAAG ACTAAGATCC AGGACAAGGA AGGAATTCCT CCGGATCAGC AGCGTCTCAT
TTTTGCCGGA AAGCAGCTCG AGGACGGACG TACTCTCTCG GACTATAACA TCCAGAAGGA
GTCCACGTTG CACTTGGTCC TTCGTCTCCG CGGAGGAAAC TAAGTTTGAA GAATTCGTTC
AAATAGTTCA AATTTAAGTA TAGTCTTGAT TGCCATAATT TTGACAGGCG TCAATATGTT
TTTTGGAATC AAGAAATCTA TGCCTCATTA GTAAGTCTGT TATAAACAGA ATATTGAAGT
GCATTA
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| Protein sequence | MQIFVKTLTG KTITLDVEPS DTIDNVKTKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LDVEPSDTID NVKTKIQDKE GIPPDQQRLI
FAGKQLEDGR TLSDYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLDVE PSDTIDNVKT
KIQDKEGIPP DQQRLIFAGK QLEDGRTLSD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT
ITLDVEPSDT IDNVKTKIQD KEGIPPDQQR LIFAGKQLED GRTLSDYNIQ KESTLHLVLR
LRGGMQIFVK TLTGKTITLD VEPSDTIDNV KTKIQDKEGI PPDQQRLIFA GKQLEDGRTL
SDYNIQKEST LHLVLRLRGG N
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