| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54478 |
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| Symbol | MS |
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| ID | 7201080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | - |
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| Start bp | 403450 |
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| End bp | 405322 |
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| Gene Length | 1873 bp |
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| Protein Length | 553 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | malate synthase |
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| Protein accession | XP_002180227 |
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| Protein GI | 219118921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0693019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTAATCCTT AGGCGCCTCA GCCGACTTTA CCCATACCGA GATACTGCCC TCCTTTTCAA
GACGTCTCTT GCGTCAGACT TTTAACAGCG CTCATCGTTT TTTTACCAAT ACAATGATTG
AATTTCGTTC GGAACAAGTA CACGTTCGCG TGCACGCGCC TGCCAACAAG GCCGCCGAAG
AAATGTTGAC GCCGGATGCG CTACGTTTGC TCGGACTGCT TTGCGAACGC TTCGATGTCC
GTCGGCAGGC TCTACTTGCA GCCCGCAAAA CCCACGCCAC TAGCTTTGAT GCTGGTGATG
TTCCTCACTT TCTGTCGGCA GAAGACCATC CCGCCCAGCG AGATCCCCAC TGGCGCTGTG
CTCCCGTCCC TGACGACGTC CAGGATCGTC GCGTGGAAAT AACGGGACCA GTGGATCGGA
AGATGGTCAT CAACGGGTTG AATAGTGGAG CATGTGTGTA CATGGCGGAC TTTGAAGACT
CCACAAGCCC TACATGGTTT AACGTGATTG ACGGACAGTT GAATTTGCGC GACGCAGTCC
GCGGTACCAT CGCGTTCACC AACGCTGCCG GAAAGGTGTA CACAGTGCAG CATGCGAGTC
GTCCAGCCAC GCTCTTTGTC CGTCCTCGTG GCTGGCATTT GGATGAGGCA CACGTCACGG
TCAACGGCAA GGTCGCGTCG GGGTCCCTCT TCGATTTTGC CATGTACTTT TTCCACAATG
TACACCATTT GAAGGAGAAG GGTACCGGGC CCTATTTCTA TTTGCCCAAA TTGGAGTCTC
ACAAGGAGGC TGCTCTATGG AATGATGTCT TTGTCGCAGC GCAACAGTTT ATGGGAGTGC
CTATCGGTAC CATTCGGGCA ACGGTTTTGT TGGAGACGAT TACAGCTGCT TTTGAAATGG
AAGAGATTCT GTACGAACTG CGTGATCATT CTCTGGGTTT GAATTGCGGT CGTTGGGATT
ATTTATTTTC GTTCATTAAA AAATTTAAGC ATCATACGGA CAAGTTGACT CCGGATCGAA
ATCACCTGAC CATGACTACG CCCCTGATGG AGGCGTACGT CAAGCGACTC ATCTACATTT
GTCACAAGCG GGGAACTTTT GCAATGGGCG GTATGAGTGC ATCAATTCCC ATCAAGAATG
ATCCAGCAGC CAACGATGCT GCCATGCAAA AGGTTGCCGA CGATAAGTTG CGCGAAGTGA
CAGCTGGACA CGATGGCTCC TGGGTTGCTC ATCCCGCCTT GGTCAAGGTG GCTAAGGATG
TGTTTGATGA ACACATGCTG ACTCCGAATC AAATTACATC CAAGCCGGGC TATGTTGGAT
CCTCCATAAA CGAGCAAGAT CTGCTGCGCT TGCCACCGAT CCCGCACGGA AAAGCCATCA
CAAGTGAGGG TCTAGCTCGA GGCGTTGGTA TCGTATTGGC GTATACCGAA GCCTGGTTGC
GCGGCATCGG GTGCATTCCC TTGCACAATG CCATGGAAGA TGCCGCTACG GCAGAAATTA
GCCGAGCCCA AATTTGGCAA TGGCGCAGCC AGAAAGCGTC GACACAAGAT GATAATAGGC
CAATCACGGC GTCTCGTGTG GCCGCATTGG TACAGCAGGA GGTAGACCGT CAATGCAATG
GTGTTGCTGG AAAGTCCAAG GGCAAATGGC GACTTGCCGG TAATTTGGTG GAAAACATGC
TCAACAAGGA TGAATTGGAC GACTTTTTGA CATCTGTTTG CTATCCACAC ATTGTCACAA
CAGCATACGA TGATGGTCGA ATCGCCAAGC TGTAGGAACC AGAACGGAGA GTCGTTGTTT
TCGATGGAAC GGTAAATTGC TGGCAAGAAA CTTGTGGACT TATTGACTAT GAGGTATTGT
TTTACAACAT TAA
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| Protein sequence | MIEFRSEQVH VRVHAPANKA AEEMLTPDAL RLLGLLCERF DVRRQALLAA RKTHATSFDA
GDVPHFLSAE DHPAQRDPHW RCAPVPDDVQ DRRVEITGPV DRKMVINGLN SGACVYMADF
EDSTSPTWFN VIDGQLNLRD AVRGTIAFTN AAGKVYTVQH ASRPATLFVR PRGWHLDEAH
VTVNGKVASG SLFDFAMYFF HNVHHLKEKG TGPYFYLPKL ESHKEAALWN DVFVAAQQFM
GVPIGTIRAT VLLETITAAF EMEEILYELR DHSLGLNCGR WDYLFSFIKK FKHHTDKLTP
DRNHLTMTTP LMEAYVKRLI YICHKRGTFA MGGMSASIPI KNDPAANDAA MQKVADDKLR
EVTAGHDGSW VAHPALVKVA KDVFDEHMLT PNQITSKPGY VGSSINEQDL LRLPPIPHGK
AITSEGLARG VGIVLAYTEA WLRGIGCIPL HNAMEDAATA EISRAQIWQW RSQKASTQDD
NRPITASRVA ALVQQEVDRQ CNGVAGKSKG KWRLAGNLVE NMLNKDELDD FLTSVCYPHI
VTTAYDDGRI AKL
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