| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_51933 |
|---|
| Symbol | PAS |
|---|
| ID | 7200921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 267978 |
|---|
| End bp | 268406 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_002180003 |
|---|
| Protein GI | 219118462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.216108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCTC TTTCCGGTTC GCAGCAAAAT TTCGCTATTT CGGATCCAAC TCTTCCCGAT
AATCCTATTG TTTATGTTAG TCAAGGATTT CTGGATTTGA CCGGATACAC GCTGGATCAG
GTCTTGGGTC GCAATTGTCG ATTTCTGCAG GGACCAGGAA CCGACCAGAG TGCAGTGGAA
GTCATTCGCA AGGGAATTAC TGAAGGAGTG GACACGTCCG TGTGTTTGCT GAATTACAAA
GCCGACGGCA CACCCTTTTG GAACCAATTC TTTGTGGCCT CTCTACGAGA CGCCGAAAAC
AACGTGGTCA ATCACGTCGG GGTTCAGTGT GAAGTGAGCA AGGCCGTGGT CGAAAAACAC
ATGGGGGAAC AAAAGAAGGC CGCAGCAGAA GCCGCCAAAG CCCGACCCGT GACCACTACT
AGTAGTTAG
|
|---|
| Protein sequence | MSALSGSQQN FAISDPTLPD NPIVYVSQGF LDLTGYTLDQ VLGRNCRFLQ GPGTDQSAVE
VIRKGITEGV DTSVCLLNYK ADGTPFWNQF FVASLRDAEN NVVNHVGVQC EVSKAVVEKH
MGEQKKAAAE AAKARPVTTT SS
|
|---|
| |