Gene PHATRDRAFT_46014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46014 
Symbol 
ID7200870 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp967161 
End bp969353 
Gene Length2193 bp 
Protein Length588 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180153 
Protein GI219118773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTGTGCAC TTTTGGAATT TTGTTGTTAC GTTGAGTTTG CTGGTAGACG TACGCTTTGT 
CCTCTTTGTA GTTTACCGAA ATGGGAGTGT GGTCAGAACC TATAAAAACC TGATCTAGAG
TCCCCCAAGT TTTGGAGTAG ATATTTGCAG AACTTGGAAA CCGCACACCA AAGGTTGAGG
ATCAGATTCT GTGCGTGGCA GTTTTCGTGG GATCGGTCGC ATCAAACCCT TATCATTTTC
TGTCCTCGTT AAAGGCACGC TGACAGAGAC ACATGGCCGA CTCTGTTTCG CGATCTCGTG
TAAAGGACTC GGACGATATC GAAAAGTCCG TTCGACGGTC ATCCCGTATT CGCCGACCCC
AACGAATACC CATCCACCGA CTTTTTGAAG ACGATGATTT GTCCGTGGAA TCCGACTCTG
CTTTGAGCCA GGCGGGAATA CACTCGTCAA GACAAAAGTA TAATCGAAAG CGAAAGGCTG
GTGAAGGCTT GACGCACGAA AAATCAGAAG CGAACAGTAG TAAAAGAAGA CCCAAGGTGT
CTGACGTCCA CGGCGCACGG GGGCCAGAAG TCAGAGTGCA CAAGAGGCTA ATTCCTGTAG
AAGACGAACC CGCTTTAATT GAGACGATTA AAAGGGAGCA TGCTGATCTT TTAAGAAGCG
ATGAAGCGCT GGAAGTGGAT AGGGCGAAGA AAATTAAGCT GCAGATGGTT CTGGTCAACA
ACGAATGGGA ACAACGATTC CTTGAGTTTC TCGTTTTCCA ACGTGTCTAC GGCCATTCTC
TCGTGCCTAA AAACTTTATG CCAAATAAGC AATTGGGACG ATGGTGCGCC AAAGTTCGTT
GTTGGTATAG TAAGAATGAT TCGAGATTGA CCCCCTCAAG GCAACGGCGA CTTAATGCAG
CGGGTTTTAT CTGGAAAGCC AAGAAAGATC CACAATTTTG GAAGATACAA AATCAATGCG
AGCAAGCTAT GGATAAGTGG GAAGACTTTT TTGATCGACT TCTTGTTTAC AAAGCTCAAA
AGGGCGACTG TTTGGTACCA AAAGAGTATC CTGAGGACAT GGTACGTTTA CGCTATAATG
TCAACCACTT TGAAAAATCC AGAAAGGCGT TGCTGATAAG ACCTCTGAAT GCTGCAGACC
CTGGCTCGAT GGGTTGCTAA AACTCGAAAG CACTACAAAG CCAAAAAAGA AGGTCGCTAT
CACACTTTGG ACGACGATAA AGAAATGAGA CTGGTGGAAG CGGGTTTTGT TTTCAACTCG
AAAACTCAGG AGCGTTTGCG ATTTACTGTG CTCAAGCGTT TTGAAGGACG TTGGGAGGAG
TATTTCAGCA AGCTTGAGAA ATACAAAGAG CGCTTCGGCC ATTGTGTCGT TCCTCGGCGG
TGGAAAGAGG ACCAGTCGTT GGCCTCTTGG GTTATGCGGC AGGTAGGTCC ATCATCGATC
CCACTACGTC CTCATGAGTA GCCAGCCAGC CATCTCATCA GATTTTGTTG TTTCTCAAAG
CGATGCCACT GGAAGCGCCT TCAACAAGGG CTTCATAGCT ACTTGACTGA AGAGCGATTA
GCAAAGCTTG AGGAGATTGG ATTCGCATTT GTGGTTGCTA GGAAAGGAAT GCCGCTACAT
ACTGGCCCTG ACCAGGAAGG CAGCGAAGAC GAAGACGAAA GCAATGAGAA TGACTCGGAT
GATGACACGG AAAGCCTTCG TTCGGACGAA GTCCAACCAA AGATCTCCCG AAGACATAGA
GAGAACGCTG GAATGGGCCT TGAAGGTGAA ACACAGAGAT CGAAAAGGTC AGCCCTCCGA
GAATCTGTCT CTTGTGTTCC TGCGGCATCC GTGTCAGTAT ATGTCACAGC GGAAGTAGCT
TCGGGAGAAG ATCTTACGGT TAGCGACCCA CATCAAAACA AGGAATCGAA GCCTGAATCG
CTGGACCCCC CTTTTTCATC TCATTGTACT GCATCAAATC CCACCGTTCA CTATGATGGA
GAGGTGAAAA GCACAAGGAG CTCTTCACAA GGTAAAAATT TATTGAGCGC TTTCCGGAGT
TCTTTGGCAG TCAAGAAATC AGAGGAGCCT CCTGTCATCA AAGGCCAATG GCGCTGCGAA
TCATGCGGAA AGGACGAATT TAGCGCGTTT GCTGAGTTTG CAGCTCACGA GCACTCTTGC
TTGGCGCTAC CAGAATTTGC CACTGTTCCC TGA
 
Protein sequence
MADSVSRSRV KDSDDIEKSV RRSSRIRRPQ RIPIHRLFED DDLSVESDSA LSQAGIHSSR 
QKYNRKRKAG EGLTHEKSEA NSSKRRPKVS DVHGARGPEV RVHKRLIPVE DEPALIETIK
REHADLLRSD EALEVDRAKK IKLQMVLVNN EWEQRFLEFL VFQRVYGHSL VPKNFMPNKQ
LGRWCAKVRC WYSKNDSRLT PSRQRRLNAA GFIWKAKKDP QFWKIQNQCE QAMDKWEDFF
DRLLVYKAQK GDCLVPKEYP EDMTLARWVA KTRKHYKAKK EGRYHTLDDD KEMRLVEAGF
VFNSKTQERL RFTVLKRFEG RWEEYFSKLE KYKERFGHCV VPRRWKEDQS LASWVMRQRC
HWKRLQQGLH SYLTEERLAK LEEIGFAFVV ARKGMPLHTG PDQEGSEDED ESNENDSDDD
TESLRSDEVQ PKISRRHREN AGMGLEGETQ RSKRSALRES VSCVPAASVS VYVTAEVASG
EDLTVSDPHQ NKESKPESLD PPFSSHCTAS NPTVHYDGEV KSTRSSSQGK NLLSAFRSSL
AVKKSEEPPV IKGQWRCESC GKDEFSAFAE FAAHEHSCLA LPEFATVP