| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46010 |
|---|
| Symbol | |
|---|
| ID | 7200867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 948229 |
|---|
| End bp | 950199 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180352 |
|---|
| Protein GI | 219119171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTCAATTTGA CACCTCGATG TGTGGTACGA CCTCCACCAT TCGCTCTGTC TTTGTTTTCT
GGAGGCAACA AGAAGACCGA GAAGAATGCG GTTGACAGCT GTTTTCCTCA CTCCGTTTGT
CGGGCTATTC TTCTCGGTTG GCAAAGCAAG TCCGGACGAA AGCTTGAATG ATGATTTGTC
TAGAGGGCCA GAATGTGAAC TACATGGCAA TTGCCGAAAG GCTCGCACGT GTACCTTGTA
CATGGCGGAA AGCACGATTC CGGGGGCAGG TCTGGGAATT TTTACTGCGA TAGACCGCAA
AATTGGAGAA AGCATTGGAA ATGGTGATGT TCTTATACCG CAAGTGGACC TTTACTATCA
TCAGGCTGCC CGAAAAACCA TAGCATCGGA GGATTACAGA GATCCCTTTG AAGACTACTT
AAGTACGGTC CCGAGATGGG AATGCAACAA GAAAGCTCCC ATCCTTTCGA ATACTTGTCC
GCGTTTGCGC CAGGTTTGGA CGCCGCTATT AACTGTCACC TCGGGCTCGT CAACGTCGAC
AAGCTCGCTC CCGAGTACGA TACGATGCCT TCCTGGCATC GGGCCGTAGA TCCCGGCGTC
GGAGCGATTA CTCCATACCA AAACTGTTCC ACGATTGCCA AGGAATTTAT TCCGGCAGGT
GGGGAGTTGT TTAAGCACTA TGGGGATCAA TGGTTTACAG GCCGCCAAGA CATTTTTGGC
TTGATGCCAT TGCTGGAGGA TTATCCCAGA GCTGAACAGT TTGCCATTGA TTTTAATTCG
ATTGCGGGAA ATACCTCGAT GGACTTTCGA CGCGATTTAT ATAAAATTGT CACTGACTTT
CCGTTCGAGA GTCGCGTCAC AAACGCTTTG CCCAATGATG TGTTGCAGGT GCCAACAATT
GTGGAAGAAG GAATCCGCGC CGTATATCAG CCCCTAGCGA CCCGAAAAGT GGAAGATTTG
GAAGCAAATG GCCGCTGTTT GGATTATCTT GCCCCCCGTC CGTCAACTCT TCCGCAAGCA
GGTCGTGGAG CATTTGCGAC GCAGTTCCTT GCGGAAGGAA CAATCGTTGC CGGAAGTCCC
TTCCTAGTGA TGGCAAATGG CGACTATTTT GACATGTTTG AAGCTAATTG GTATGACAAG
ACCTATCCTC CGGACATTTC CCGAAAAACT CGATCGCAAT TGGGATTAAA CTACTGTTGG
ACGCACGCGG ACGCTAGTTT GTTTTTGTGC CCTTACGGCG CAAATGTAAA CTACATCAAT
CACAATCCTG AACCCAACAT TCGCGTACAA TGGGCTCGCG CTCAAAGCAT GAGACACAAC
GAGCAATGGC TTCACCAAAG TCCCACTGAG ATGCTGGTGT CGTCCAGTCC GGGGCTGTTT
CTCGATTTCA TAGCATTGCG GGACATTGAA GAAGGGGAAG AAGTCTTTAT TGACTACGGG
CCAAAATGGG AATTGGCATG GCAGGCACAC GTCGAGTACT GGACGACAAG CAACTACAGT
CACAGCTATC AGTCGGCGCG GGTGTACAGT AAAGCTAATG CGAATAAACC CTTTCGGTCA
CAAAGTGAGC AAGAGGTGGA TCCATATCCT TCTTACTACG AATTCCGCTG CTTAGATGTG
GCTTGGTACT ATCCAAAGCA GCATCAAAAT GTCTGGATGC TATGGAACCG AACGCGAACT
TTTGGTTTCA ATTGTCGTAT TTTGGAACAC AGGACGTCAC CTGAAGGGAC TTTCTACTAC
AAGGTCGAGC TGCAAGCGCC GCAGCACAAG GATGTTTGGG GAGAACAATG GGACCCGTCC
AAAGCAAGAG CGGAAACGTG GTACACACGA GACTCGTGGT TCCCACAACA TCAAGTGGTT
CTAGTCGACT TGGCCTACTC AACCGACATC TTCTTGTCAG ACGCTTTTCG ACACCCCATA
GCGATACCAG ATAGTATTTT CCCAGACGCT TGGCGAGGTT TTGTTGCGTA A
|
|---|
| Protein sequence | MGMQQESSHP FEYLSAFAPG LDAAINCHLG LVNVDKLAPE YDTMPSWHRA VDPGVGAITP
YQNCSTIAKE FIPAGGELFK HYGDQWFTGR QDIFGLMPLL EDYPRAEQFA IDFNSIAGNT
SMDFRRDLYK IVTDFPFESR VTNALPNDVL QVPTIVEEGI RAVYQPLATR KVEDLEANGR
CLDYLAPRPS TLPQAGRGAF ATQFLAEGTI VAGSPFLVMA NGDYFDMFEA NWYDKTYPPD
ISRKTRSQLG LNYCWTHADA SLFLCPYGAN VNYINHNPEP NIRVQWARAQ SMRHNEQWLH
QSPTEMLVSS SPGLFLDFIA LRDIEEGEEV FIDYGPKWEL AWQAHVEYWT TSNYSHSYQS
ARVYSKANAN KPFRSQSEQE VDPYPSYYEF RCLDVAWYYP KQHQNVWMLW NRTRTFGFNC
RILEHRTSPE GTFYYKVELQ APQHKDVWGE QWDPSKARAE TWYTRDSWFP QHQVVLVDLA
YSTDIFLSDA FRHPIAIPDS IFPDAWRGFV A
|
|---|
| |