Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45995 |
Symbol | |
ID | 7201056 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 893715 |
End bp | 895501 |
Gene Length | 1787 bp |
Protein Length | 559 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180137 |
Protein GI | 219118740 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0105991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCAAATTGAG CATGACTCCA ATCTACTTCC TGCCTTCGTG GCTGCTTGCG GCTACGCTCC TTCTTCAACG ATTGACCCCA ACTTTTTCCA ATTGCGGCAC AAAAGACCCA TCGCCCTTCG AACAGCGCTT AGATCAGATT CGAATTAAGC ACTTGAAGAA CTCCCCGCAA GGTCGCCGAT TGATTGCGGA CTCCTGCGAA GATCTTTGCA CCCAGTGTGT GGAGATAGAC GTCTACTTTC ATTTGAGCGC CATTCCTATT CCGACAGACG ACGGCAGCGG TAGCGAACAG TTCATTTTCC CTCATCCTCT CGAGTCGGTT GCTCGCTTGG CGGCAAGTGA TGCGACACTG GCTATCGAAG ACTTTGCGTC GCTGCAAGAT ATCTACAGCC TGATCGACAC GAACATGCAG GTACTCAATG AGCGGTATGC GGAGTCCCCG TTTATATTTA CTTGGAAAAA CGCAGATCCT GCCAGTGCCA GCGTTTCCGC CAATCCAGAC ATGGTGGACT TTGCACTGGA AACCTTGTTT GACGAGAATG GCGTGGCTGC GGAACTGCAT ACCGGGGACG CTAGCGTGCT GAATGTCTAC CTGACGTATT CGCAATGCCT ATTGACTGAG GAAACCGACC CAGACACAGG CGAAGCGGCT TCCGACTGTA GCATCGTTGG CGTGGCCGTC TTTCCGAGCT ATCAGCAAGC CAATCGTCGA GCCGATGGTG TCTATGTCAA CTACAGCACT CTGTCTGGGG GAGGGTACGT ACACAGAAAT GGCTGCAGAC TTTCTGTGTT AGGCAAATGG TAGCACGCAA CGAACGGTCA CTTACGCAAT ATGTCTTCCT TCCTTTCCAG CCTTCCGAGC AACGATGTTG GGTTGACTTT GGTTCATGAA GTAGGCCACT GGCTGGGACT GTACCATACC TTCCAGAACA CTGGTGAAGA TGAGGGTGTA GATCCATGCT CACCAGAGAA CGGGAACGAC TACGTTGCCG ATACACCCAT CCAGTCCGCC TCGTCCCAGG AGCTGTACGA ATGCTCGTTA AGTTTTTACG AGGGCGAAGA GCTCCCAGAC TCATGTCCCG ACTTGGCTGG AAGCGACCCT GTGTTCAACT ACATGAACTA TGTCTCGGAC GAAAAATGCT GGCCTCCCGG CGTAGGTGAA TTTACGTGTG GACAGTATGA GCGAATGTAC ATGCAATGGC TTCTGTACCG CCGGTCGAAC GAACCCTGCC AAGACAATGA AATTGATATT GAAATTTCGA TGGAGATCAG CGAACTCTTT ACTGAAGAAA ACGCATTTTA CCTTACATAT GTCGACACCG GTGAAGTGGT GCTTAATTCG ACACGTGATT TTGAAGCCCT TGGGCCTCCT TATCAAACTG AAGTGAAATC TGACTTTTGT GCTCCCGTTG GACAATACTC GTTGGTACTC GTGGACAATG CTCTAAACGG ATTCCTGGAT GGTGGGTTTG TCGAAGTGAC TGTCAATGGC GACCTGGTAG AACGTGTTTC CGGAAACTTT GGAGAAATGG TCACTATTAA CTTTGGAAAT ACAGCCGGGG ATCCAGGCAC AGTCCCGAGT AACAGCACTC CCAGCCCGGC GATAGAAAAT GGTCCAACGC AAAGTCCTGT GATGAACAAC CCGCCAACAC TGAGCCCAGA GAATGGAACT GTTCCTGAAG GTGGTACTTC CCAGGTCAGC GATGCATCGT CCCATGGTTG GTCCCACACA ACCATCAGCT TCGTTATTGG TTGGGCGATA TTGTGTGTTG GAATTGTCCA TATGTGA
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Protein sequence | MTPIYFLPSW LLAATLLLQR LTPTFSNCGT KDPSPFEQRL DQIRIKHLKN SPQGRRLIAD SCEDLCTQCV EIDVYFHLSA IPIPTDDGSG SEQFIFPHPL ESVARLAASD ATLAIEDFAS LQDIYSLIDT NMQVLNERYA ESPFIFTWKN ADPASASVSA NPDMVDFALE TLFDENGVAA ELHTGDASVL NVYLTYSQCL LTEETDPDTG EAASDCSIVG VAVFPSYQQA NRRADGVYVN YSTLSGGGLP SNDVGLTLVH EVGHWLGLYH TFQNTGEDEG VDPCSPENGN DYVADTPIQS ASSQELYECS LSFYEGEELP DSCPDLAGSD PVFNYMNYVS DEKCWPPGVG EFTCGQYERM YMQWLLYRRS NEPCQDNEID IEISMEISEL FTEENAFYLT YVDTGEVVLN STRDFEALGP PYQTEVKSDF CAPVGQYSLV LVDNALNGFL DGGFVEVTVN GDLVERVSGN FGEMVTINFG NTAGDPGTVP SNSTPSPAIE NGPTQSPVMN NPPTLSPENG TVPEGGTSQV SDASSHGWSH TTISFVIGWA ILCVGIVHM
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