Gene PHATRDRAFT_45995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45995 
Symbol 
ID7201056 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp893715 
End bp895501 
Gene Length1787 bp 
Protein Length559 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180137 
Protein GI219118740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0105991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCAAATTGAG CATGACTCCA ATCTACTTCC TGCCTTCGTG GCTGCTTGCG GCTACGCTCC 
TTCTTCAACG ATTGACCCCA ACTTTTTCCA ATTGCGGCAC AAAAGACCCA TCGCCCTTCG
AACAGCGCTT AGATCAGATT CGAATTAAGC ACTTGAAGAA CTCCCCGCAA GGTCGCCGAT
TGATTGCGGA CTCCTGCGAA GATCTTTGCA CCCAGTGTGT GGAGATAGAC GTCTACTTTC
ATTTGAGCGC CATTCCTATT CCGACAGACG ACGGCAGCGG TAGCGAACAG TTCATTTTCC
CTCATCCTCT CGAGTCGGTT GCTCGCTTGG CGGCAAGTGA TGCGACACTG GCTATCGAAG
ACTTTGCGTC GCTGCAAGAT ATCTACAGCC TGATCGACAC GAACATGCAG GTACTCAATG
AGCGGTATGC GGAGTCCCCG TTTATATTTA CTTGGAAAAA CGCAGATCCT GCCAGTGCCA
GCGTTTCCGC CAATCCAGAC ATGGTGGACT TTGCACTGGA AACCTTGTTT GACGAGAATG
GCGTGGCTGC GGAACTGCAT ACCGGGGACG CTAGCGTGCT GAATGTCTAC CTGACGTATT
CGCAATGCCT ATTGACTGAG GAAACCGACC CAGACACAGG CGAAGCGGCT TCCGACTGTA
GCATCGTTGG CGTGGCCGTC TTTCCGAGCT ATCAGCAAGC CAATCGTCGA GCCGATGGTG
TCTATGTCAA CTACAGCACT CTGTCTGGGG GAGGGTACGT ACACAGAAAT GGCTGCAGAC
TTTCTGTGTT AGGCAAATGG TAGCACGCAA CGAACGGTCA CTTACGCAAT ATGTCTTCCT
TCCTTTCCAG CCTTCCGAGC AACGATGTTG GGTTGACTTT GGTTCATGAA GTAGGCCACT
GGCTGGGACT GTACCATACC TTCCAGAACA CTGGTGAAGA TGAGGGTGTA GATCCATGCT
CACCAGAGAA CGGGAACGAC TACGTTGCCG ATACACCCAT CCAGTCCGCC TCGTCCCAGG
AGCTGTACGA ATGCTCGTTA AGTTTTTACG AGGGCGAAGA GCTCCCAGAC TCATGTCCCG
ACTTGGCTGG AAGCGACCCT GTGTTCAACT ACATGAACTA TGTCTCGGAC GAAAAATGCT
GGCCTCCCGG CGTAGGTGAA TTTACGTGTG GACAGTATGA GCGAATGTAC ATGCAATGGC
TTCTGTACCG CCGGTCGAAC GAACCCTGCC AAGACAATGA AATTGATATT GAAATTTCGA
TGGAGATCAG CGAACTCTTT ACTGAAGAAA ACGCATTTTA CCTTACATAT GTCGACACCG
GTGAAGTGGT GCTTAATTCG ACACGTGATT TTGAAGCCCT TGGGCCTCCT TATCAAACTG
AAGTGAAATC TGACTTTTGT GCTCCCGTTG GACAATACTC GTTGGTACTC GTGGACAATG
CTCTAAACGG ATTCCTGGAT GGTGGGTTTG TCGAAGTGAC TGTCAATGGC GACCTGGTAG
AACGTGTTTC CGGAAACTTT GGAGAAATGG TCACTATTAA CTTTGGAAAT ACAGCCGGGG
ATCCAGGCAC AGTCCCGAGT AACAGCACTC CCAGCCCGGC GATAGAAAAT GGTCCAACGC
AAAGTCCTGT GATGAACAAC CCGCCAACAC TGAGCCCAGA GAATGGAACT GTTCCTGAAG
GTGGTACTTC CCAGGTCAGC GATGCATCGT CCCATGGTTG GTCCCACACA ACCATCAGCT
TCGTTATTGG TTGGGCGATA TTGTGTGTTG GAATTGTCCA TATGTGA
 
Protein sequence
MTPIYFLPSW LLAATLLLQR LTPTFSNCGT KDPSPFEQRL DQIRIKHLKN SPQGRRLIAD 
SCEDLCTQCV EIDVYFHLSA IPIPTDDGSG SEQFIFPHPL ESVARLAASD ATLAIEDFAS
LQDIYSLIDT NMQVLNERYA ESPFIFTWKN ADPASASVSA NPDMVDFALE TLFDENGVAA
ELHTGDASVL NVYLTYSQCL LTEETDPDTG EAASDCSIVG VAVFPSYQQA NRRADGVYVN
YSTLSGGGLP SNDVGLTLVH EVGHWLGLYH TFQNTGEDEG VDPCSPENGN DYVADTPIQS
ASSQELYECS LSFYEGEELP DSCPDLAGSD PVFNYMNYVS DEKCWPPGVG EFTCGQYERM
YMQWLLYRRS NEPCQDNEID IEISMEISEL FTEENAFYLT YVDTGEVVLN STRDFEALGP
PYQTEVKSDF CAPVGQYSLV LVDNALNGFL DGGFVEVTVN GDLVERVSGN FGEMVTINFG
NTAGDPGTVP SNSTPSPAIE NGPTQSPVMN NPPTLSPENG TVPEGGTSQV SDASSHGWSH
TTISFVIGWA ILCVGIVHM