Gene PHATRDRAFT_45987 details

Gene Information

• Locus tag: PHATRDRAFT_45987
• ID: 7201052
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 866304
• End bp: 873808
• Gene Length: 7505 bp
• Protein Length: 2344 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180337
• Protein GI: 219119141

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA CCGAAGAAGA CCATTACGCC GACGCAATGG AAGTAGAAGC CGTCGCTGCG 
GAAGACGAAA TGTCTTCTGC TGAGGACAAC GCCGACGATG ACGAAGAAGA AGAAGAAGCG 
ATCGTGGAAG CCCAAGCGGT GGAAGCCCAC AATGATGACG ACGACGTTGG TGACGATGAT 
GACCACAATA ATAACGAGGA GTTTGCCGCA GTCGCGGCTC CCATCGAGGA CGAAGAAGAT 
GACGACGACG AAGAAGAAGC CGTAGCTGCG GCGGTGGTGG TAGACGAAGA CGAGGATAGC 
AATGAAGTGG ACGTGCACAC ACTTCCCCCC TCCAAGCCAA GACCCACCAA GTCCTCATCT 
GGAGCAGCCG GCGGTGCAAC TGCCAAAAAG GTGAACAAAA AGAAGAAGAC CGCGGCGGCC 
TCTACCAAAA AGTCAACTGC GAGTAATTCA ACGACCACAA CGCAACCGCC CTCCAAAAAG 
AAAAAGAAGA AAAAGCCCGA AGGGTCGTCC TCCGAACTCG CCGGCTACGC TAAGGTTCCC 
CCGGAACGTC TCGAAGCCGG TGCCGATGCC CGTGCCATGC TCCGCGAAAC CGTACCCACG 
CTACCCATGG CCGTAGCCGA AACCCAAGTC CGTTCCTTTG GGCATTTGGT ACTGGACAGT 
CCCAAAGATG CGGCCGCGCA CAGTCGATTC GCTACTACTA GCGCATTGTA TCCCATTGGC 
TTTTCTTGTG ATCGCTACGA GTTCAGTCCG GTGCACGGTC GCACGCTCAA ATTGCGCTGT 
TCCATACTAG ACGGTCGAAT CATCAAACGT AAGCAAAAGG CCTCGGGTCA TCCCGTCTCC 
AAAATTCACG ATGGTCCCAT CTTTCGCATT CTATGGGGTC GCGGAGTCGA CGAGGAAGTG 
GACACGATTG ATTATCCCTT TGATCCCAAG ATACACGCCC AGCCCGTCGG CCGCAAGGAC 
AAGAGCAGTA GCTCGGCCTC GACCACTTCA CTCGGAGCGT TGTTTCTCCC GGAACCCCAC 
ATGCGCGTCA AGGTGCGCTT CGACAAGCAT CAATATTTTG GCGGAACAGT CCTTTCGGTG 
GTCAAACCGG AAGTGACGTC GCCTAAATTC AAAAAGGCGC GCACGGCATC GTCAGTGGCA 
ATCCGCATTC GCTACGACGA CGGATCCGTC GAAACAATTC AGTATCCCGA TCCCGACGTC 
AAACTAGCCA TGCCAGGTAC GCTTTTTTAT TTTGGTTTTT ATTTTTTGTG TTACTCATCT 
TTGTCCTCTG GCACTCACAT GTATACGGAT TTACTTTTAC AGGTGCCGAA AACGACATTG 
ACGATCAAGG ACGATTAGAA TTGACACAGA TCGATGACAA GCCCGTCATG TCTGTCGTCG 
GAGAGTCTCC ACTGGAAGCC TGGGGGAAAG TCTTGACAAA ACTTGGTCTG CTGGATGAGA 
TCATGCTTGA TATGGCAATG GACCAAGTCG TCAAGTCTCG AGCACAAGGT CTACAAGAAG 
CCAAGCAAAA GCTGGAAGGA AAATTTCCCT TGCCGCCGCA TCACGTCCCG CGTTCCGTCA 
CCAAGTCCCC CCTTCCCGAT CGAGGATCTC CTGATAGTAG AGCGGCTTCA CCATATCCAG 
TTTCGTCCAA CGGTGACGAT GAGGGTGTAT CGACTCCTGC AATGGAGGAA TCAAACGATG 
GAGAGCAAGC CGTCGAGGCC GAACAAATAG ACGAAGATCG TGAGCCCATG TCGGAACGCG 
AAAAGCATCT ACGGGAAATG CTGCAGGAGG TGACGGAAGA GTTGGAGGAA GTAGAAGCAG 
AGGAACGGTC GGCGGCCATT GCGTTAGCCG ACGCACGTAT TCACGCTGTG GGTCCACTTT 
TGTGCAATCC TTTCCATGAT GATGAGTCTG GGAAGTCGCA GCAAAGTTCG TGGCTGGCTA 
CGGCCGTCCG AAAAGAAAAA ACTCGAATGG GTAGTACCGG TAACAGGCGC AAGGTGGTTA 
CAGCACTCGA TCTGTTGGAG CGCAACGATA CGTTTTACAA CGCTGATATT GAAGCTTTGA 
TCGAGGGTCT TCCAGGAAGC GAATATTGCG GTGCGTATGT CTACCAGGCT TTCCGATCTG 
GCGGATCGAC TTTATTGAAT CGTGCATGGA TCCACGAAGC ACAGTTGCGT CAAGAGAAAG 
AAGCCATAAA ACTTCTCAAG CGCTCGAGAG AGTGTGAAGT CAAGGAACAG CAAGAACAGG 
AACGCGCTCA AAAGAAGCGC AAACGAGAAG AAGACAGAGA TGAAAAGAAA AGACAAAGGC 
TGGAGGAGGA AGACCACAGG CGAAAGCTTC GCATCGACGA ACGCCTTTCT AAGCTCAAGC 
TTCAGGTTGA AGACCGGTTG TATAAGGAAG CATCCTTTCA GAGAGAAAGG GCTGCTGCTG 
TTCTTGCCAA AAGTGTCTCG AAGGAGTTCG TCCGTAGGCG GCGGGCGGCA GAGTTGGTCG 
CTAGTCAGTC CATCATTGAA GAAAAGAATA GAGCGTCGAT CCGAGGAGCT GATGCAATGG 
TTGCTTTGTC AGCAATCCCT CCGATCTCCA AGATTTACGA CGAGGATTCG GTTCGCGTTT 
GGAATTTTAT GTCGACCTTT GGAACCTTTT TTCTTGAGAG AGGCTTTATC GCCGAGATTC 
CCACCTTGGA TTCTCTTCAA GACGCTGTTG ACTGCCTTCG TGGTACTTCA AGGGTGACAG 
CAATGGCTGC CGATGACGCT GTGACATCAC TTACTGATTT AGCCATTGCT CTCTGCAAGC 
CTCTGGCTGC TAGTCTGACA CGCGTGTTGT TTGCAAGCCT TATTGCACTG AATCCGATTC 
TGCAAAAAGA CTTTGGAGCG GCATTTTTCA ATGAAGTAAA TGCAACTTCG ACAAAGGATA 
GAAAAGAAGA GGAGGCTGGC GACGAACCCA CAACACAGCC ATCTGACCTT TTACTACCGG 
TCAACTCAAT GACATGGCAA GACATAGCTC GAGTTTCTTT CCTTTCTGAT GCTCTTGGCG 
AACTTGGATA CGCGAGGCAC GAAGCTGCTC ACTTATTGCG TGGATACAGA AGCGCAGGTC 
ATCCTAATTC TAAGGAAGCG CGTCGCCTTC GACAGGCAGA GGACAATGCA ATTGCTCTTT 
TGCGTCAAGA GATTTCAAGT TGTACGGATG TACAAAAGAG AGATCCAAAA GTGCCGTTTC 
GAATTGAAGT TCCTTGCCGG CCGACTGCTG CTGCACTGGA CTTACGCTTC TTCTTGTCGA 
ATATCAAGTC GGCATCTGAC AAGGCTTTTT ATGTAATCCA CGACAATCTA GCCAGCGCTA 
TTCGTGTACT GCCATCCTTG CCGCTTGACG AGGCGCTTCT TGTACAGAGC AACCTTGAAC 
AGGCGACAAA TCTAATCCAA GGTATTGCTG AATCTGAGCA TCCTTCAAAA AATGAATTGA 
AAGTGTTACG AAAGGTCCGT AACCTCTGCA TTGACTCGCT TGAAAAAGCA AGTGCAAACA 
AGTCGACGAA TTGGACATGG AAGCAACGGC AAGAAGCCAC ACTTGTCCTT GGTGATGGGA 
CAAGAACGGT TGCAACTCGT CAAACAATGG GATTACTGGA TGGTCTCCTT TTATGTAAGA 
GTGAATTTAA GGAACTTTCG CATCGGCGGG AGAAATATAT GGAAGACGCA CTACGTCTGA 
AGGAAGAAAT GGAACGAGAA AAACTGAAAG ACGAAGATGA TGAGGACGAC GAGGACGAGG 
ACGATGAAGA CGACAACGGG GAGAGCCGTG TGGAAATCGT TGCGCAGATT GATTTAAATC 
ACACCGACAG CCCAAGCGAC GCCAAAGAGC TTCGAGAGTC CACAGATTTA CCGGTAAAGA 
TTGGCAAGGA GACGCCTTAC GATGACTTCT GCGCAGACAT TCCCCTTGCC CCAGAGTTAA 
TCCGTAGGTG TCTGGCTGTT CTGCGTGCGC TCGCAATGAC CGGGCCAGCG GAACCATTCC 
ATTATCCCGT TGACCCTCAA ACCAATCCCG GATACTACGA TATGGTCCTG CAGCCAATGT 
GTCTGCGCGA AGCGGGACGG CAGTTGCGAG TTGCTGCCGA TGCTCATCGG AAAGCCCGCA 
ATCAGCATGA TCAAAGCATT GAAGCTGCTG TCGCTCAATT TGGTAGGAAT ATACGCCTGA 
TTGCGCAGAA CTGCCTATCG TACGCGAACG CTGGCCCCAC TGTCATAAGC GCGGGTTCAG 
AGTTGCTTCG AATTTTTGAG CGCCTTTTTC TTGACTGGGT ACTCGCTCCC GATCATCTGC 
TTCCTTCGTT AAACGAGCTG GATGATGATC GATGTATTGA TCACCATCCG TCAGATGAGC 
AATCAACGGT GTTGCTGTGT GACAGTTGCG AAGGGAAATT CAACATCACC CGACTAAACC 
CCCCGCTTCG GGACATCCCG AAAGGTGATT GGTTTTGCCC TCGCTGCGTA AGCGGTCGCT 
GGTGGGGTCA TCTTGATCCG CGCATCGGAA AGAGGGTGAA AGGGGGTACC GACAATTCTT 
TTGAAGGTAA TGGGGAAGCT ACAATAGAGA AATGCGCTTT TAGATGCCCG GAGAAGCGAC 
AAGGAAATTC GACTTTGATG TACCAAGTAA GGTTTATCGA CGGACGTATT GAACAGTGGT 
CGTTGGAGAA GCTAGACAGT GCTTTAGCCA TATCCGGCTT GTCCGTTCCC GCGATTAAGT 
GTCTTGAAGC AGTTTCCGAG AGCCCTGGGT ATGGTTATGG AGTCGACCAC GGGCTTCGTG 
TCGATCTGGT TCCTGTTCCG CTCAATCCAT ACGTGTCGGA CGCGGCTGCG CAGGTCGTAT 
TATCAAGCTC GGTCTTTCGC GATACCATTA CAGCTTCTGC GACATTGCTT GTGATCGATC 
CTAGAGAAAT GACAGCATCA GAATGGCTGA GGCTACTTGT TCTTCTCACT ATGAAATGCT 
CCTCAAGTGA CGTCATTCAA AACGTTGTTA GCGAAATGGA ATCGAAGGCA GCTGAAACTA 
TGTCTTTAAG TCTCGAGAAA CTTTCAAAGG TAACGGATAT CAAAGACATC CTACCAGAAG 
TCATTGAAGA TGACGGTGAC GTCCCTCCAA TTGAAGAGTC TGCAAGTCAT GTTATAGGCG 
AGTCGGATTT TGTTGAAAGT CAGCGATTTG ACACGTCCAA TGGAAAGTCG GATGAGACTC 
GACCGTCCAC CCCGAAAGTT GAGCGATTCA GTGTTGTTGA GGCCAGCTCT GTTGAATTTG 
TGGAAGACGT TGACATGGAC ACGATGCCAG ATACGCCTGG TTCCATTTCA ACACAAGAAG 
CCACTCAAGT TGCTGAAGCG ATTCCGATCA ATCAGGAGAA GGTAGATATT CACGTCAAGG 
CAAAGAAAGC GAAATCCAAG AGGGACAGAA TCATCGAGGA CAGCATAGTC GGATACAATG 
TTAAGTCTCA ACTTCGCCCT GCACTAGCTT CCTTTGAACA GGACAGTGTG TCGAGTGTGA 
TTGATTCCAG CCTAACTAAA AATCCCACGC TCGACTTTTC AAAGATGCGT TGCCGTCGTA 
CGGTCTGCCA TTTCTGTGGA CTAACAGACG CCGCACTCGG TCTTCCTCTA GTTCGCGTCC 
CGAACGAAGA AGAATGGAGC AGTTTGATAG CTCTAGCATC AAGAGGTAGA CGGACGCATT 
TAATTGCCGA AGTTCCTGCT ATCGACGTTG TTTCCAGTCC CCATACCAAG CATAAAGAGC 
CGAAACTTGT GTCATTGTCA ATACGTGTCG GCGAAGAGAT TATTTCAGCC AAAGAGACGC 
TTTTCACGAA GTTAGACGAT GTTGGAATGC TTCAACTTAT CCCCAGATCA GAACAAGGGT 
TTCAGTCGGA TTTGTTGTTC AAGTACAATC TTGGTCTTCC GTTTGTGTCT GGCTCGCTAT 
CCGCCCATGA AAGTTGTGCT GTAGCTGCTC ATAATGCACG CAAGGAGATG ATGATTGAGA 
AGTACAGAGC ACGACGAGCC GAGCTTGTTG AAAAAGAAGC TGGAATGGCG TGTGGTCGAA 
CTCTCCAACT CGGACAGGAT CGGATGGGTC GCACTTTTTG GAAGTTCCTG AGCGACTCAG 
AGTCTCTTTT TGTCTGTACC GACTCGACTG GAAAGTCGGC TCCATCCGAT CAACCTGTTT 
GGCATCGATA TTCATATCCT GAGAGTATAG CAAGCGTTTT GGTCGGGCTA GACAAGGATG 
ATGTTGTCAA GGACTTAGAA AGGGTGTTCC CCTTTGCGGT TCGCATGGTG AAGGAAAGAA 
CTTGGACGGA TATGCTGCTT AAGAAAAAAT TTCCTCAAGT CAGCCATTTC TTGAGCCGTG 
GTGCTCACAG CAATGGGGAT GCTATGGATA TCAACGGCGA ACGATCAGTC GAAGTGGAAG 
GGGGGTTTGA TGTACGTAAA ACCGGTATGT GTTATGTTTT ACGCTCTCTG TTTTCTAACT 
CTTGTTGTAA AACTGCAGCC TTACTCTGAG GGCGAGGAAG TGTTGGTGGA GTCGAAGTCC 
GGAGACCTTC TTTGGGATGC CAGTGTGATT GAAGTGTCAA CGGGGAGCGG GGATGACTTG 
GTCAGAGTAA TTGACGCTTA CAAGGTCTCT TACAACGGTT GGAGCGCTCG TTTTGAAGAT 
TGGGTGAAGC CTAGTCGGGT AATTGAGCCG AACGAAAATA ACCGATTATT GCAGGACGAA 
TTACTAGAAC AGTATTCGGA GACTCGCGGC GGTTTGCCAC CAGCGCTTAA CATGTTGAGG 
GCGAAGGATT ACCTAAACAT CCGGGATCGT GCTCGCGGAA ATTTGCCGCT TCCCGATTTT 
GCTCGGATCG CCTACTTGAA TGAAGGCATG TCATCGAGCG AAAAGACTTT TGGTTTGGCG 
AAAGCAGCTC TTCTTGCGGT TGACGCTGCC CTTCCCATTG GTTCGCTGGA TGCCACGGAC 
AAAGGTCCGT GGCGCTCAAC ATACGCAGAA CGGTGGAGAT CAATGGTAAA GAAAGCCGAA 
GGACCGGCGC AGCTCATGAG GTGTATCATT TTGTTGGAAG ATACCATCAC TGAGGATTGG 
ATCAAGCAGG ATCTGGGACA CTTGCGCACA GTTTTACCTG GGCGTTGGAA AGCTTTAGGA 
GAAGCGACAC CAGCAGGCCT AGCCATGCGC ATTATCCTCT TGGACCGAGC CATTATGTAC 
GAAACTGTAG ATCGCAAGCG ATTTTCTTGC AAAAAAAAGC AGAAGTAATC AAGTTTCGTC 
ATGAATGCTT TGTCAGCAAG TATTAACAGA CAAGATGGAC CCACAAAGCC GCACTTTTGG 
GCTTTGCTAT TGACTGTGAC TATGTTATCA TTTTTTTGCT GACAACGTCA ATACTACAGT 
GCCGAGTAGA CGTAGAAACA GTTCTGTGAA CCCTACACAA AGGCGAGAAA AGTGGAATCC 
TCAACAGGAA ATTTGGTGCT TTGGTCTCTT TTGAAGCAAA TAGTCACAGG TTATTATGGT 
TGACAATTTT GGCAACCTAA TATCATTGAT GTAATAGTAA AAGAAACGTC ACACTTTCTA 
TTCGT 

 

Protein sequence

MSDTEEDHYA DAMEVEAVAA EDEMSSAEDN ADDDEEEEEA IVEAQAVEAH NDDDDVGDDD 
DHNNNEEFAA VAAPIEDEED DDDEEEAVAA AVVVDEDEDS NEVDVHTLPP SKPRPTKSSS 
GAAGGATAKK VNKKKKTAAA STKKSTASNS TTTTQPPSKK KKKKKPEGSS SELAGYAKVP 
PERLEAGADA RAMLRETVPT LPMAVAETQV RSFGHLVLDS PKDAAAHSRF ATTSALYPIG 
FSCDRYEFSP VHGRTLKLRC SILDGRIIKR KQKASGHPVS KIHDGPIFRI LWGRGVDEEV 
DTIDYPFDPK IHAQPVGRKD KSSSSASTTS LGALFLPEPH MRVKVRFDKH QYFGGTVLSV 
VKPEVTSPKF KKARTASSVA IRIRYDDGSV ETIQYPDPDV KLAMPGAEND IDDQGRLELT 
QIDDKPVMSV VGESPLEAWG KVLTKLGLLD EIMLDMAMDQ VVKSRAQGLQ EAKQKLEGKF 
PLPPHHVPRS VTKSPLPDRG SPDSRAASPY PVSSNGDDEG VSTPAMEESN DGEQAVEAEQ 
IDEDREPMSE REKHLREMLQ EVTEELEEVE AEERSAAIAL ADARIHAVGP LLCNPFHDDE 
SGKSQQSSWL ATAVRKEKTR MGSTGNRRKV VTALDLLERN DTFYNADIEA LIEGLPGSEY 
CGAYVYQAFR SGGSTLLNRA WIHEAQLRQE KEAIKLLKRS RECEVKEQQE QERAQKKRKR 
EEDRDEKKRQ RLEEEDHRRK LRIDERLSKL KLQVEDRLYK EASFQRERAA AVLAKSVSKE 
FVRRRRAAEL VASQSIIEEK NRASIRGADA MVALSAIPPI SKIYDEDSVR VWNFMSTFGT 
FFLERGFIAE IPTLDSLQDA VDCLRGTSRV TAMAADDAVT SLTDLAIALC KPLAASLTRV 
LFASLIALNP ILQKDFGAAF FNEVNATSTK DRKEEEAGDE PTTQPSDLLL PVNSMTWQDI 
ARVSFLSDAL GELGYARHEA AHLLRGYRSA GHPNSKEARR LRQAEDNAIA LLRQEISSCT 
DVQKRDPKVP FRIEVPCRPT AAALDLRFFL SNIKSASDKA FYVIHDNLAS AIRVLPSLPL 
DEALLVQSNL EQATNLIQGI AESEHPSKNE LKVLRKVRNL CIDSLEKASA NKSTNWTWKQ 
RQEATLVLGD GTRTVATRQT MGLLDGLLLC KSEFKELSHR REKYMEDALR LKEEMEREKL 
KDEDDEDDED EDDEDDNGES RVEIVAQIDL NHTDSPSDAK ELRESTDLPV KIGKETPYDD 
FCADIPLAPE LIRRCLAVLR ALAMTGPAEP FHYPVDPQTN PGYYDMVLQP MCLREAGRQL 
RVAADAHRKA RNQHDQSIEA AVAQFGRNIR LIAQNCLSYA NAGPTVISAG SELLRIFERL 
FLDWVLAPDH LLPSLNELDD DRCIDHHPSD EQSTVLLCDS CEGKFNITRL NPPLRDIPKG 
DWFCPRCVSG RWWGHLDPRI GKRVKGGTDN SFEGNGEATI EKCAFRCPEK RQGNSTLMYQ 
VRFIDGRIEQ WSLEKLDSAL AISGLSVPAI KCLEAVSESP GYGYGVDHGL RVDLVPVPLN 
PYVSDAAAQV VLSSSVFRDT ITASATLLVI DPREMTASEW LRLLVLLTMK CSSSDVIQNV 
VSEMESKAAE TMSLSLEKLS KVTDIKDILP EVIEDDGDVP PIEESASHVI GESDFVESQR 
FDTSNGKSDE TRPSTPKVER FSVVEASSVE FVEDVDMDTM PDTPGSISTQ EATQVAEAIP 
INQEKVDIHV KAKKAKSKRD RIIEDSIVGY NVKSQLRPAL ASFEQDSVSS VIDSSLTKNP 
TLDFSKMRCR RTVCHFCGLT DAALGLPLVR VPNEEEWSSL IALASRGRRT HLIAEVPAID 
VVSSPHTKHK EPKLVSLSIR VGEEIISAKE TLFTKLDDVG MLQLIPRSEQ GFQSDLLFKY 
NLGLPFVSGS LSAHESCAVA AHNARKEMMI EKYRARRAEL VEKEAGMACG RTLQLGQDRM 
GRTFWKFLSD SESLFVCTDS TGKSAPSDQP VWHRYSYPES IASVLVGLDK DDVVKDLERV 
FPFAVRMVKE RTWTDMLLKK KFPQVSHFLS RGAHSNGDAM DINGERSVEV EGGFDPYSEG 
EEVLVESKSG DLLWDASVIE VSTGSGDDLV RVIDAYKVSY NGWSARFEDW VKPSRVIEPN 
ENNRLLQDEL LEQYSETRGG LPPALNMLRA KDYLNIRDRA RGNLPLPDFA RIAYLNEGMS 
SSEKTFGLAK AALLAVDAAL PIGSLDATDK GPWRSTYAER WRSMVKKAEG PAQLMRCIIL 
LEDTITEDWI KQDLGHLRTV LPGRWKALGE ATPAGLAMRI ILLDRAIMYE TVDRKRFSCK 
KKQK