Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45987 |
Symbol | |
ID | 7201052 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 866304 |
End bp | 873808 |
Gene Length | 7505 bp |
Protein Length | 2344 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180337 |
Protein GI | 219119141 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACA CCGAAGAAGA CCATTACGCC GACGCAATGG AAGTAGAAGC CGTCGCTGCG GAAGACGAAA TGTCTTCTGC TGAGGACAAC GCCGACGATG ACGAAGAAGA AGAAGAAGCG ATCGTGGAAG CCCAAGCGGT GGAAGCCCAC AATGATGACG ACGACGTTGG TGACGATGAT GACCACAATA ATAACGAGGA GTTTGCCGCA GTCGCGGCTC CCATCGAGGA CGAAGAAGAT GACGACGACG AAGAAGAAGC CGTAGCTGCG GCGGTGGTGG TAGACGAAGA CGAGGATAGC AATGAAGTGG ACGTGCACAC ACTTCCCCCC TCCAAGCCAA GACCCACCAA GTCCTCATCT GGAGCAGCCG GCGGTGCAAC TGCCAAAAAG GTGAACAAAA AGAAGAAGAC CGCGGCGGCC TCTACCAAAA AGTCAACTGC GAGTAATTCA ACGACCACAA CGCAACCGCC CTCCAAAAAG AAAAAGAAGA AAAAGCCCGA AGGGTCGTCC TCCGAACTCG CCGGCTACGC TAAGGTTCCC CCGGAACGTC TCGAAGCCGG TGCCGATGCC CGTGCCATGC TCCGCGAAAC CGTACCCACG CTACCCATGG CCGTAGCCGA AACCCAAGTC CGTTCCTTTG GGCATTTGGT ACTGGACAGT CCCAAAGATG CGGCCGCGCA CAGTCGATTC GCTACTACTA GCGCATTGTA TCCCATTGGC TTTTCTTGTG ATCGCTACGA GTTCAGTCCG GTGCACGGTC GCACGCTCAA ATTGCGCTGT TCCATACTAG ACGGTCGAAT CATCAAACGT AAGCAAAAGG CCTCGGGTCA TCCCGTCTCC AAAATTCACG ATGGTCCCAT CTTTCGCATT CTATGGGGTC GCGGAGTCGA CGAGGAAGTG GACACGATTG ATTATCCCTT TGATCCCAAG ATACACGCCC AGCCCGTCGG CCGCAAGGAC AAGAGCAGTA GCTCGGCCTC GACCACTTCA CTCGGAGCGT TGTTTCTCCC GGAACCCCAC ATGCGCGTCA AGGTGCGCTT CGACAAGCAT CAATATTTTG GCGGAACAGT CCTTTCGGTG GTCAAACCGG AAGTGACGTC GCCTAAATTC AAAAAGGCGC GCACGGCATC GTCAGTGGCA ATCCGCATTC GCTACGACGA CGGATCCGTC GAAACAATTC AGTATCCCGA TCCCGACGTC AAACTAGCCA TGCCAGGTAC GCTTTTTTAT TTTGGTTTTT ATTTTTTGTG TTACTCATCT TTGTCCTCTG GCACTCACAT GTATACGGAT TTACTTTTAC AGGTGCCGAA AACGACATTG ACGATCAAGG ACGATTAGAA TTGACACAGA TCGATGACAA GCCCGTCATG TCTGTCGTCG GAGAGTCTCC ACTGGAAGCC TGGGGGAAAG TCTTGACAAA ACTTGGTCTG CTGGATGAGA TCATGCTTGA TATGGCAATG GACCAAGTCG TCAAGTCTCG AGCACAAGGT CTACAAGAAG CCAAGCAAAA GCTGGAAGGA AAATTTCCCT TGCCGCCGCA TCACGTCCCG CGTTCCGTCA CCAAGTCCCC CCTTCCCGAT CGAGGATCTC CTGATAGTAG AGCGGCTTCA CCATATCCAG TTTCGTCCAA CGGTGACGAT GAGGGTGTAT CGACTCCTGC AATGGAGGAA TCAAACGATG GAGAGCAAGC CGTCGAGGCC GAACAAATAG ACGAAGATCG TGAGCCCATG TCGGAACGCG AAAAGCATCT ACGGGAAATG CTGCAGGAGG TGACGGAAGA GTTGGAGGAA GTAGAAGCAG AGGAACGGTC GGCGGCCATT GCGTTAGCCG ACGCACGTAT TCACGCTGTG GGTCCACTTT TGTGCAATCC TTTCCATGAT GATGAGTCTG GGAAGTCGCA GCAAAGTTCG TGGCTGGCTA CGGCCGTCCG AAAAGAAAAA ACTCGAATGG GTAGTACCGG TAACAGGCGC AAGGTGGTTA CAGCACTCGA TCTGTTGGAG CGCAACGATA CGTTTTACAA CGCTGATATT GAAGCTTTGA TCGAGGGTCT TCCAGGAAGC GAATATTGCG GTGCGTATGT CTACCAGGCT TTCCGATCTG GCGGATCGAC TTTATTGAAT CGTGCATGGA TCCACGAAGC ACAGTTGCGT CAAGAGAAAG AAGCCATAAA ACTTCTCAAG CGCTCGAGAG AGTGTGAAGT CAAGGAACAG CAAGAACAGG AACGCGCTCA AAAGAAGCGC AAACGAGAAG AAGACAGAGA TGAAAAGAAA AGACAAAGGC TGGAGGAGGA AGACCACAGG CGAAAGCTTC GCATCGACGA ACGCCTTTCT AAGCTCAAGC TTCAGGTTGA AGACCGGTTG TATAAGGAAG CATCCTTTCA GAGAGAAAGG GCTGCTGCTG TTCTTGCCAA AAGTGTCTCG AAGGAGTTCG TCCGTAGGCG GCGGGCGGCA GAGTTGGTCG CTAGTCAGTC CATCATTGAA GAAAAGAATA GAGCGTCGAT CCGAGGAGCT GATGCAATGG TTGCTTTGTC AGCAATCCCT CCGATCTCCA AGATTTACGA CGAGGATTCG GTTCGCGTTT GGAATTTTAT GTCGACCTTT GGAACCTTTT TTCTTGAGAG AGGCTTTATC GCCGAGATTC CCACCTTGGA TTCTCTTCAA GACGCTGTTG ACTGCCTTCG TGGTACTTCA AGGGTGACAG CAATGGCTGC CGATGACGCT GTGACATCAC TTACTGATTT AGCCATTGCT CTCTGCAAGC CTCTGGCTGC TAGTCTGACA CGCGTGTTGT TTGCAAGCCT TATTGCACTG AATCCGATTC TGCAAAAAGA CTTTGGAGCG GCATTTTTCA ATGAAGTAAA TGCAACTTCG ACAAAGGATA GAAAAGAAGA GGAGGCTGGC GACGAACCCA CAACACAGCC ATCTGACCTT TTACTACCGG TCAACTCAAT GACATGGCAA GACATAGCTC GAGTTTCTTT CCTTTCTGAT GCTCTTGGCG AACTTGGATA CGCGAGGCAC GAAGCTGCTC ACTTATTGCG TGGATACAGA AGCGCAGGTC ATCCTAATTC TAAGGAAGCG CGTCGCCTTC GACAGGCAGA GGACAATGCA ATTGCTCTTT TGCGTCAAGA GATTTCAAGT TGTACGGATG TACAAAAGAG AGATCCAAAA GTGCCGTTTC GAATTGAAGT TCCTTGCCGG CCGACTGCTG CTGCACTGGA CTTACGCTTC TTCTTGTCGA ATATCAAGTC GGCATCTGAC AAGGCTTTTT ATGTAATCCA CGACAATCTA GCCAGCGCTA TTCGTGTACT GCCATCCTTG CCGCTTGACG AGGCGCTTCT TGTACAGAGC AACCTTGAAC AGGCGACAAA TCTAATCCAA GGTATTGCTG AATCTGAGCA TCCTTCAAAA AATGAATTGA AAGTGTTACG AAAGGTCCGT AACCTCTGCA TTGACTCGCT TGAAAAAGCA AGTGCAAACA AGTCGACGAA TTGGACATGG AAGCAACGGC AAGAAGCCAC ACTTGTCCTT GGTGATGGGA CAAGAACGGT TGCAACTCGT CAAACAATGG GATTACTGGA TGGTCTCCTT TTATGTAAGA GTGAATTTAA GGAACTTTCG CATCGGCGGG AGAAATATAT GGAAGACGCA CTACGTCTGA AGGAAGAAAT GGAACGAGAA AAACTGAAAG ACGAAGATGA TGAGGACGAC GAGGACGAGG ACGATGAAGA CGACAACGGG GAGAGCCGTG TGGAAATCGT TGCGCAGATT GATTTAAATC ACACCGACAG CCCAAGCGAC GCCAAAGAGC TTCGAGAGTC CACAGATTTA CCGGTAAAGA TTGGCAAGGA GACGCCTTAC GATGACTTCT GCGCAGACAT TCCCCTTGCC CCAGAGTTAA TCCGTAGGTG TCTGGCTGTT CTGCGTGCGC TCGCAATGAC CGGGCCAGCG GAACCATTCC ATTATCCCGT TGACCCTCAA ACCAATCCCG GATACTACGA TATGGTCCTG CAGCCAATGT GTCTGCGCGA AGCGGGACGG CAGTTGCGAG TTGCTGCCGA TGCTCATCGG AAAGCCCGCA ATCAGCATGA TCAAAGCATT GAAGCTGCTG TCGCTCAATT TGGTAGGAAT ATACGCCTGA TTGCGCAGAA CTGCCTATCG TACGCGAACG CTGGCCCCAC TGTCATAAGC GCGGGTTCAG AGTTGCTTCG AATTTTTGAG CGCCTTTTTC TTGACTGGGT ACTCGCTCCC GATCATCTGC TTCCTTCGTT AAACGAGCTG GATGATGATC GATGTATTGA TCACCATCCG TCAGATGAGC AATCAACGGT GTTGCTGTGT GACAGTTGCG AAGGGAAATT CAACATCACC CGACTAAACC CCCCGCTTCG GGACATCCCG AAAGGTGATT GGTTTTGCCC TCGCTGCGTA AGCGGTCGCT GGTGGGGTCA TCTTGATCCG CGCATCGGAA AGAGGGTGAA AGGGGGTACC GACAATTCTT TTGAAGGTAA TGGGGAAGCT ACAATAGAGA AATGCGCTTT TAGATGCCCG GAGAAGCGAC AAGGAAATTC GACTTTGATG TACCAAGTAA GGTTTATCGA CGGACGTATT GAACAGTGGT CGTTGGAGAA GCTAGACAGT GCTTTAGCCA TATCCGGCTT GTCCGTTCCC GCGATTAAGT GTCTTGAAGC AGTTTCCGAG AGCCCTGGGT ATGGTTATGG AGTCGACCAC GGGCTTCGTG TCGATCTGGT TCCTGTTCCG CTCAATCCAT ACGTGTCGGA CGCGGCTGCG CAGGTCGTAT TATCAAGCTC GGTCTTTCGC GATACCATTA CAGCTTCTGC GACATTGCTT GTGATCGATC CTAGAGAAAT GACAGCATCA GAATGGCTGA GGCTACTTGT TCTTCTCACT ATGAAATGCT CCTCAAGTGA CGTCATTCAA AACGTTGTTA GCGAAATGGA ATCGAAGGCA GCTGAAACTA TGTCTTTAAG TCTCGAGAAA CTTTCAAAGG TAACGGATAT CAAAGACATC CTACCAGAAG TCATTGAAGA TGACGGTGAC GTCCCTCCAA TTGAAGAGTC TGCAAGTCAT GTTATAGGCG AGTCGGATTT TGTTGAAAGT CAGCGATTTG ACACGTCCAA TGGAAAGTCG GATGAGACTC GACCGTCCAC CCCGAAAGTT GAGCGATTCA GTGTTGTTGA GGCCAGCTCT GTTGAATTTG TGGAAGACGT TGACATGGAC ACGATGCCAG ATACGCCTGG TTCCATTTCA ACACAAGAAG CCACTCAAGT TGCTGAAGCG ATTCCGATCA ATCAGGAGAA GGTAGATATT CACGTCAAGG CAAAGAAAGC GAAATCCAAG AGGGACAGAA TCATCGAGGA CAGCATAGTC GGATACAATG TTAAGTCTCA ACTTCGCCCT GCACTAGCTT CCTTTGAACA GGACAGTGTG TCGAGTGTGA TTGATTCCAG CCTAACTAAA AATCCCACGC TCGACTTTTC AAAGATGCGT TGCCGTCGTA CGGTCTGCCA TTTCTGTGGA CTAACAGACG CCGCACTCGG TCTTCCTCTA GTTCGCGTCC CGAACGAAGA AGAATGGAGC AGTTTGATAG CTCTAGCATC AAGAGGTAGA CGGACGCATT TAATTGCCGA AGTTCCTGCT ATCGACGTTG TTTCCAGTCC CCATACCAAG CATAAAGAGC CGAAACTTGT GTCATTGTCA ATACGTGTCG GCGAAGAGAT TATTTCAGCC AAAGAGACGC TTTTCACGAA GTTAGACGAT GTTGGAATGC TTCAACTTAT CCCCAGATCA GAACAAGGGT TTCAGTCGGA TTTGTTGTTC AAGTACAATC TTGGTCTTCC GTTTGTGTCT GGCTCGCTAT CCGCCCATGA AAGTTGTGCT GTAGCTGCTC ATAATGCACG CAAGGAGATG ATGATTGAGA AGTACAGAGC ACGACGAGCC GAGCTTGTTG AAAAAGAAGC TGGAATGGCG TGTGGTCGAA CTCTCCAACT CGGACAGGAT CGGATGGGTC GCACTTTTTG GAAGTTCCTG AGCGACTCAG AGTCTCTTTT TGTCTGTACC GACTCGACTG GAAAGTCGGC TCCATCCGAT CAACCTGTTT GGCATCGATA TTCATATCCT GAGAGTATAG CAAGCGTTTT GGTCGGGCTA GACAAGGATG ATGTTGTCAA GGACTTAGAA AGGGTGTTCC CCTTTGCGGT TCGCATGGTG AAGGAAAGAA CTTGGACGGA TATGCTGCTT AAGAAAAAAT TTCCTCAAGT CAGCCATTTC TTGAGCCGTG GTGCTCACAG CAATGGGGAT GCTATGGATA TCAACGGCGA ACGATCAGTC GAAGTGGAAG GGGGGTTTGA TGTACGTAAA ACCGGTATGT GTTATGTTTT ACGCTCTCTG TTTTCTAACT CTTGTTGTAA AACTGCAGCC TTACTCTGAG GGCGAGGAAG TGTTGGTGGA GTCGAAGTCC GGAGACCTTC TTTGGGATGC CAGTGTGATT GAAGTGTCAA CGGGGAGCGG GGATGACTTG GTCAGAGTAA TTGACGCTTA CAAGGTCTCT TACAACGGTT GGAGCGCTCG TTTTGAAGAT TGGGTGAAGC CTAGTCGGGT AATTGAGCCG AACGAAAATA ACCGATTATT GCAGGACGAA TTACTAGAAC AGTATTCGGA GACTCGCGGC GGTTTGCCAC CAGCGCTTAA CATGTTGAGG GCGAAGGATT ACCTAAACAT CCGGGATCGT GCTCGCGGAA ATTTGCCGCT TCCCGATTTT GCTCGGATCG CCTACTTGAA TGAAGGCATG TCATCGAGCG AAAAGACTTT TGGTTTGGCG AAAGCAGCTC TTCTTGCGGT TGACGCTGCC CTTCCCATTG GTTCGCTGGA TGCCACGGAC AAAGGTCCGT GGCGCTCAAC ATACGCAGAA CGGTGGAGAT CAATGGTAAA GAAAGCCGAA GGACCGGCGC AGCTCATGAG GTGTATCATT TTGTTGGAAG ATACCATCAC TGAGGATTGG ATCAAGCAGG ATCTGGGACA CTTGCGCACA GTTTTACCTG GGCGTTGGAA AGCTTTAGGA GAAGCGACAC CAGCAGGCCT AGCCATGCGC ATTATCCTCT TGGACCGAGC CATTATGTAC GAAACTGTAG ATCGCAAGCG ATTTTCTTGC AAAAAAAAGC AGAAGTAATC AAGTTTCGTC ATGAATGCTT TGTCAGCAAG TATTAACAGA CAAGATGGAC CCACAAAGCC GCACTTTTGG GCTTTGCTAT TGACTGTGAC TATGTTATCA TTTTTTTGCT GACAACGTCA ATACTACAGT GCCGAGTAGA CGTAGAAACA GTTCTGTGAA CCCTACACAA AGGCGAGAAA AGTGGAATCC TCAACAGGAA ATTTGGTGCT TTGGTCTCTT TTGAAGCAAA TAGTCACAGG TTATTATGGT TGACAATTTT GGCAACCTAA TATCATTGAT GTAATAGTAA AAGAAACGTC ACACTTTCTA TTCGT
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Protein sequence | MSDTEEDHYA DAMEVEAVAA EDEMSSAEDN ADDDEEEEEA IVEAQAVEAH NDDDDVGDDD DHNNNEEFAA VAAPIEDEED DDDEEEAVAA AVVVDEDEDS NEVDVHTLPP SKPRPTKSSS GAAGGATAKK VNKKKKTAAA STKKSTASNS TTTTQPPSKK KKKKKPEGSS SELAGYAKVP PERLEAGADA RAMLRETVPT LPMAVAETQV RSFGHLVLDS PKDAAAHSRF ATTSALYPIG FSCDRYEFSP VHGRTLKLRC SILDGRIIKR KQKASGHPVS KIHDGPIFRI LWGRGVDEEV DTIDYPFDPK IHAQPVGRKD KSSSSASTTS LGALFLPEPH MRVKVRFDKH QYFGGTVLSV VKPEVTSPKF KKARTASSVA IRIRYDDGSV ETIQYPDPDV KLAMPGAEND IDDQGRLELT QIDDKPVMSV VGESPLEAWG KVLTKLGLLD EIMLDMAMDQ VVKSRAQGLQ EAKQKLEGKF PLPPHHVPRS VTKSPLPDRG SPDSRAASPY PVSSNGDDEG VSTPAMEESN DGEQAVEAEQ IDEDREPMSE REKHLREMLQ EVTEELEEVE AEERSAAIAL ADARIHAVGP LLCNPFHDDE SGKSQQSSWL ATAVRKEKTR MGSTGNRRKV VTALDLLERN DTFYNADIEA LIEGLPGSEY CGAYVYQAFR SGGSTLLNRA WIHEAQLRQE KEAIKLLKRS RECEVKEQQE QERAQKKRKR EEDRDEKKRQ RLEEEDHRRK LRIDERLSKL KLQVEDRLYK EASFQRERAA AVLAKSVSKE FVRRRRAAEL VASQSIIEEK NRASIRGADA MVALSAIPPI SKIYDEDSVR VWNFMSTFGT FFLERGFIAE IPTLDSLQDA VDCLRGTSRV TAMAADDAVT SLTDLAIALC KPLAASLTRV LFASLIALNP ILQKDFGAAF FNEVNATSTK DRKEEEAGDE PTTQPSDLLL PVNSMTWQDI ARVSFLSDAL GELGYARHEA AHLLRGYRSA GHPNSKEARR LRQAEDNAIA LLRQEISSCT DVQKRDPKVP FRIEVPCRPT AAALDLRFFL SNIKSASDKA FYVIHDNLAS AIRVLPSLPL DEALLVQSNL EQATNLIQGI AESEHPSKNE LKVLRKVRNL CIDSLEKASA NKSTNWTWKQ RQEATLVLGD GTRTVATRQT MGLLDGLLLC KSEFKELSHR REKYMEDALR LKEEMEREKL KDEDDEDDED EDDEDDNGES RVEIVAQIDL NHTDSPSDAK ELRESTDLPV KIGKETPYDD FCADIPLAPE LIRRCLAVLR ALAMTGPAEP FHYPVDPQTN PGYYDMVLQP MCLREAGRQL RVAADAHRKA RNQHDQSIEA AVAQFGRNIR LIAQNCLSYA NAGPTVISAG SELLRIFERL FLDWVLAPDH LLPSLNELDD DRCIDHHPSD EQSTVLLCDS CEGKFNITRL NPPLRDIPKG DWFCPRCVSG RWWGHLDPRI GKRVKGGTDN SFEGNGEATI EKCAFRCPEK RQGNSTLMYQ VRFIDGRIEQ WSLEKLDSAL AISGLSVPAI KCLEAVSESP GYGYGVDHGL RVDLVPVPLN PYVSDAAAQV VLSSSVFRDT ITASATLLVI DPREMTASEW LRLLVLLTMK CSSSDVIQNV VSEMESKAAE TMSLSLEKLS KVTDIKDILP EVIEDDGDVP PIEESASHVI GESDFVESQR FDTSNGKSDE TRPSTPKVER FSVVEASSVE FVEDVDMDTM PDTPGSISTQ EATQVAEAIP INQEKVDIHV KAKKAKSKRD RIIEDSIVGY NVKSQLRPAL ASFEQDSVSS VIDSSLTKNP TLDFSKMRCR RTVCHFCGLT DAALGLPLVR VPNEEEWSSL IALASRGRRT HLIAEVPAID VVSSPHTKHK EPKLVSLSIR VGEEIISAKE TLFTKLDDVG MLQLIPRSEQ GFQSDLLFKY NLGLPFVSGS LSAHESCAVA AHNARKEMMI EKYRARRAEL VEKEAGMACG RTLQLGQDRM GRTFWKFLSD SESLFVCTDS TGKSAPSDQP VWHRYSYPES IASVLVGLDK DDVVKDLERV FPFAVRMVKE RTWTDMLLKK KFPQVSHFLS RGAHSNGDAM DINGERSVEV EGGFDPYSEG EEVLVESKSG DLLWDASVIE VSTGSGDDLV RVIDAYKVSY NGWSARFEDW VKPSRVIEPN ENNRLLQDEL LEQYSETRGG LPPALNMLRA KDYLNIRDRA RGNLPLPDFA RIAYLNEGMS SSEKTFGLAK AALLAVDAAL PIGSLDATDK GPWRSTYAER WRSMVKKAEG PAQLMRCIIL LEDTITEDWI KQDLGHLRTV LPGRWKALGE ATPAGLAMRI ILLDRAIMYE TVDRKRFSCK KKQK
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