Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45982 |
Symbol | |
ID | 7201048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 848352 |
End bp | 849394 |
Gene Length | 1043 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180333 |
Protein GI | 219119133 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.284408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCAAA GAGAGAACCG CGATAAGGAA ACATTCGTTT ACGAGCAGCC GACATTGACA CGCGACACAA GAGAAAAACG CCAAGAAGGT TGCTGCAGTG GATGTCGACA AACATTCTTC GGTCTTAGGG AATTTGGTTC GGACAGCTCA AACCCGCAAC AGCTCGATTT ACATGCTACG TTTGCTCCAA GGGGCGTTCT CATTTTCATT TGGAAAGCTA TCGTCGCCAT CTTTGTAATA GCGACCTTCG TGTACACCCT TGTCGACTCG CAGTATAGAG GATTCTACTT TGCTTATGTG ACCAACTGGT CGCTTCTTGT TTCCTGCGTA TATGTTATCT TAAGTCTATT CAACTCATGC TGTGTATCTC ACCGTCAGCA TCCGGGTGAA CGACAAAGAA TTGGAACCAT TACTGCATTG ACGTGGATTT CTTATGTTAT TGCTTCACAC GCCGAGCCCT TGGTAACGAT CTTCTTCTGG TCGGCCGAGT ACACACGTGA GCTCGAGGTA AACTTTGATT CGCTGGCTCC ACACGGTCTA GTGGCAGTTC TGATACTGGT AGACGGGATT TTAATCAATC GTATACCCGT CCGTTGGATC CATTATTGGT ATTTGATCGT TCCCTACGAT TTGATTTATC TGCTCTGGAC AGTATTGCAC TTTGTTTTTG ATGTTGGCAA TCCAAACCAG AGTGATCAAG ATCCGAGTTC CAACGACGAC GCTATTTACC AAGTTTTGCA GTGGGAAGAC GACTGGGAAA TGGCTTTGGT ATTGACCGTT CTTGTGTTTG TCATTGGTCC TATCTTCTTT TTTCTGCAAC GGCGTTTAAC TATGTACAGA TTTCTCTGCG GAGACAACCG CTTACGATTA CGCTACATAC AAAACAATGA TAATGTGGAA CCCGATAACA CAGGAGATTC TGATGTGTAA ATTCATCTTT GACGAAGGGC TGGGTAGATT GTGAGGCCTC TTGGATTAAA AGAGGTTCAG CTGGATACAC AATTCATCTC CTTTATGTAA ATAGGGATGT ACATTGACGA TAA
|
Protein sequence | MNQRENRDKE TFVYEQPTLT RDTREKRQEG CCSGCRQTFF GLREFGSDSS NPQQLDLHAT FAPRGVLIFI WKAIVAIFVI ATFVYTLVDS QYRGFYFAYV TNWSLLVSCV YVILSLFNSC CVSHRQHPGE RQRIGTITAL TWISYVIASH AEPLVTIFFW SAEYTRELEV NFDSLAPHGL VAVLILVDGI LINRIPVRWI HYWYLIVPYD LIYLLWTVLH FVFDVGNPNQ SDQDPSSNDD AIYQVLQWED DWEMALVLTV LVFVIGPIFF FLQRRLTMYR FLCGDNRLRL RYIQNNDNVE PDNTGDSDV
|
| |