Gene PHATRDRAFT_45982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45982 
Symbol 
ID7201048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp848352 
End bp849394 
Gene Length1043 bp 
Protein Length309 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180333 
Protein GI219119133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.284408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAA GAGAGAACCG CGATAAGGAA ACATTCGTTT ACGAGCAGCC GACATTGACA 
CGCGACACAA GAGAAAAACG CCAAGAAGGT TGCTGCAGTG GATGTCGACA AACATTCTTC
GGTCTTAGGG AATTTGGTTC GGACAGCTCA AACCCGCAAC AGCTCGATTT ACATGCTACG
TTTGCTCCAA GGGGCGTTCT CATTTTCATT TGGAAAGCTA TCGTCGCCAT CTTTGTAATA
GCGACCTTCG TGTACACCCT TGTCGACTCG CAGTATAGAG GATTCTACTT TGCTTATGTG
ACCAACTGGT CGCTTCTTGT TTCCTGCGTA TATGTTATCT TAAGTCTATT CAACTCATGC
TGTGTATCTC ACCGTCAGCA TCCGGGTGAA CGACAAAGAA TTGGAACCAT TACTGCATTG
ACGTGGATTT CTTATGTTAT TGCTTCACAC GCCGAGCCCT TGGTAACGAT CTTCTTCTGG
TCGGCCGAGT ACACACGTGA GCTCGAGGTA AACTTTGATT CGCTGGCTCC ACACGGTCTA
GTGGCAGTTC TGATACTGGT AGACGGGATT TTAATCAATC GTATACCCGT CCGTTGGATC
CATTATTGGT ATTTGATCGT TCCCTACGAT TTGATTTATC TGCTCTGGAC AGTATTGCAC
TTTGTTTTTG ATGTTGGCAA TCCAAACCAG AGTGATCAAG ATCCGAGTTC CAACGACGAC
GCTATTTACC AAGTTTTGCA GTGGGAAGAC GACTGGGAAA TGGCTTTGGT ATTGACCGTT
CTTGTGTTTG TCATTGGTCC TATCTTCTTT TTTCTGCAAC GGCGTTTAAC TATGTACAGA
TTTCTCTGCG GAGACAACCG CTTACGATTA CGCTACATAC AAAACAATGA TAATGTGGAA
CCCGATAACA CAGGAGATTC TGATGTGTAA ATTCATCTTT GACGAAGGGC TGGGTAGATT
GTGAGGCCTC TTGGATTAAA AGAGGTTCAG CTGGATACAC AATTCATCTC CTTTATGTAA
ATAGGGATGT ACATTGACGA TAA
 
Protein sequence
MNQRENRDKE TFVYEQPTLT RDTREKRQEG CCSGCRQTFF GLREFGSDSS NPQQLDLHAT 
FAPRGVLIFI WKAIVAIFVI ATFVYTLVDS QYRGFYFAYV TNWSLLVSCV YVILSLFNSC
CVSHRQHPGE RQRIGTITAL TWISYVIASH AEPLVTIFFW SAEYTRELEV NFDSLAPHGL
VAVLILVDGI LINRIPVRWI HYWYLIVPYD LIYLLWTVLH FVFDVGNPNQ SDQDPSSNDD
AIYQVLQWED DWEMALVLTV LVFVIGPIFF FLQRRLTMYR FLCGDNRLRL RYIQNNDNVE
PDNTGDSDV