Gene PHATRDRAFT_45981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45981 
Symbol 
ID7200850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp846850 
End bp848017 
Gene Length1168 bp 
Protein Length330 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180332 
Protein GI219119131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.106123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAGGTACTT CCAACGGCTC CTTCTCCGTC CCCTTAACAC CGCTTTTTCG CTGGCTCGTC 
CTGGATGCAC ACTCGACTCA CACGTCAGCT TCCGGATACT TCTTTGTCGG CTATCGCGGC
AGAAGAGTTA GAGAACACCT CGTTCCATCG ATCACTTCTC TGTTAGCGAA ACAATATGAA
GAAGAAGTGC GAAGAAAACG AGGAGACTAG CTTTTGGGGC GGTTACTATG GGAAGAGTAG
CCATAGGAAC AACCGAAAGG ATAATTCGTT AGAAAGCGGT ACACGTCGTG ACCGTACATC
CTGCTGTGTC AGGTTTAAAG CCGAAATCCA TCCTTGTCAA GACTGGTTTC TCGTTGCAGA
CTCAGGATCT AGTCGAAAAC TCGACATTCC TGAATCGTTT GCTCCCGAAG GGAAACGCGT
TATCTTGTGG AAGACCCTGG CAACTGGATT GACAATTGGA ACCTTGCTTT ATACATGGAC
CGAGACTGGC AACCCCGATT TCTATCTAGC ATATGTGACT AGCTGGTCTC TGCTAGCCTC
ATCTCTCTAC ATGACATTGA GCTTCTTCAA CACGATTCTC GCCAGCCGCA CTCCTCAACC
CCCGGAACGT GCTACTGGCC GAATCAAAGC GACTTGGATT TTTTACGTCC TCGCCACTCA
CGGTGAAATG ATCGTGACAG TCTTGTACTG GTGGGCCGAG TATACACCGG ATATTCCCAT
TCGGTTTGCC AATTTGGCCC CGCATGGCGG TGTTTTGATG CTCATCTTTT TCGATGGCGT
CTGGGTGAAT CGCATCCCCA TTCGATGGAT GCACTGGTGG GGACTGGTAC TGCCCTTTGA
CTGTTCATAC TTGTTGTGGA CAATCATCCA CGCATTCTTG GATATTGGCA ACCCAAACAA
AACGAGCAGC AGCGCCGAGA TGAACGATGA CGCAATCTAT CGTGCATTGG AATGGCAGAC
CGATTGGCAG GAGGCTTTGA TTATGTCAAT TCTCGTTGTT TTTGTGGTTG GACCAGTTCT
TTTTTTCGCA CAGTGGATGT TGACTTTGTA TTTGCTACCT TGTTGTTGCG TTCGCGACCA
GTTGCGATAC TTGGACAGTC CGCAGCAGGA CAACAAGGCC AACATTTCCG ACGTGGAGGA
GGGATCTATC TTTGCCAAAT GGGGTTAA
 
Protein sequence
MKKKCEENEE TSFWGGYYGK SSHRNNRKDN SLESGTRRDR TSCCVRFKAE IHPCQDWFLV 
ADSGSSRKLD IPESFAPEGK RVILWKTLAT GLTIGTLLYT WTETGNPDFY LAYVTSWSLL
ASSLYMTLSF FNTILASRTP QPPERATGRI KATWIFYVLA THGEMIVTVL YWWAEYTPDI
PIRFANLAPH GGVLMLIFFD GVWVNRIPIR WMHWWGLVLP FDCSYLLWTI IHAFLDIGNP
NKTSSSAEMN DDAIYRALEW QTDWQEALIM SILVVFVVGP VLFFAQWMLT LYLLPCCCVR
DQLRYLDSPQ QDNKANISDV EEGSIFAKWG