| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45980 |
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| Symbol | |
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| ID | 7201047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 845268 |
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| End bp | 846314 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180131 |
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| Protein GI | 219118728 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00043599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAT CGGTAAGCGA TCCTCTTGCG ACACACGGAA TGCTCGTGTT GAGTATCCTC
TCGGCGGCAG CACTTGTCGG AAGTGTGTTT TACATATTTT ACCCCGCTGT GGAGGTGTTT
CGACGGGGTG CCCGAGGCAA GGACACCCTA GACGTTCTAC AAAATGCGGA ACGAGTTTCT
GCAACGAACC CACCATTGAT TTCTATCATT ATACCTGCCT ATAATGAAGA AGAGAGAATC
ACGATTATGC TGCAAGAAGC CTTCGACTAT CTATCCTTGA AATCCTGCCC GGCGTTGGAA
TCTCTGAGGC AGGCGGTTCG TCACTACAAT TCGCTCGCCA CCGTCGATTC GCGAACAATC
GAATGGATTG TTGTCAACGA CGGTTCGACT GATCAAACAT GCCAAGTCTA CGAATCGTTT
GTAAGGAATA TTCCGAAACA ACAAACACCC ATGACTTGGA AGTGTCTCAG TCTAGCTCGC
AACTCTGGCA AAGGGGCGGC CGTCCAGGCC GGCATGCTCC GGGCGAAGGG ATTGTTTCGT
CTCATGGTTG ATGCTGACGG CGCGACGTCG TTTAGACCGG GTTTAGAAGC CGTCACTGCT
TCGTTGCAAG GAACACAAGC GCCCATCGTG TTTGGGAGTC GCGCACACTT GGAGCAAACG
GTCCAACGCA GTTTCGTGCG TACAACCTTG ATGAAAGGCT TTCACATCCT CGTTGAATGG
CTTGTTGGAG CTCACGAAAT TCGGGATACT CAGTGTGGCT TCAAGATCTT TCGAGACGAT
GCCGCTGCCG TTCTGTTTGA GACCTTGCAT TTACAACGCT GGGCCTTTGA TACGGAACTC
GTCTTTGTCG CGCATCGACT CCAATTGCCC ATGCAAGAAG TGGCTGTACC CTGGCACGAG
GTAGAAGGCA GCAAACTGCA TACCAGTGCG TTTTCGCTCA TTGTGGTCGC GGTTCAGATG
CTGCGCGATA TGCTCTGCGT GCGGCTCTGC TATACGTTCG GACTCTGGAA GGTTGTAACC
TTACAACCAG CCTCGAAAGA GGACTGA
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| Protein sequence | MSASVSDPLA THGMLVLSIL SAAALVGSVF YIFYPAVEVF RRGARGKDTL DVLQNAERVS
ATNPPLISII IPAYNEEERI TIMLQEAFDY LSLKSCPALE SLRQAVRHYN SLATVDSRTI
EWIVVNDGST DQTCQVYESF VRNIPKQQTP MTWKCLSLAR NSGKGAAVQA GMLRAKGLFR
LMVDADGATS FRPGLEAVTA SLQGTQAPIV FGSRAHLEQT VQRSFVRTTL MKGFHILVEW
LVGAHEIRDT QCGFKIFRDD AAAVLFETLH LQRWAFDTEL VFVAHRLQLP MQEVAVPWHE
VEGSKLHTSA FSLIVVAVQM LRDMLCVRLC YTFGLWKVVT LQPASKED
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