| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45964 |
|---|
| Symbol | |
|---|
| ID | 7200839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 788982 |
|---|
| End bp | 790316 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180315 |
|---|
| Protein GI | 219119097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGGCTCCACC CAACTCTAAC ATGACATCTG ATCCCAACGA ACTTGTCACA AAAAAGTCGC
TCGCAATCGC TTTGTCAGCT CCAAGAGCTC CGCCTTCCGG GTCGACTCAC CGTGCTGCCA
TGCTAGGCCG AGAGGTGACG GAAAATCCGT ATCACAAATC GTTGACCGAC ACGACCAGTC
CTCGTCTCCA ACAACGCCTT TTCCGCCAGC TGCGCAACGC GTATCGAACC GCTGCAAGCC
ATGCACCGCA TCCTCATCTG CCTTCGGCTC TGGATACTGG GGACGTCGTG ACACGTGCAC
TGGGAGCGTG GCTGAGCGTG GCGTCCCAAA ATCGATTTCG TGATTCGGGA GGCTTTCGGC
GTTTGGTCGA CTTCCTCGTC GTACTTTCGG CACCCGCAAT TCCACTTTCC GCGCCGTCGG
CAGGCTGGAA TTTCTTGATG CTCACTAAGC AAGTAAAGAA ATTGCGGTAC GGATTGAATT
CTCTGCAATA TATCGACTTC TTTCTACCTT ACGATCCTGC CGAAACGTTT ACGAACACTA
GGTCAGCTCG CCGATTGATT TTCTTCGTAC ACGGTGGTGC CTGGGGAAGC GGTGAGCCAT
GGATGTATCG TCTGGTGGCT GGTGCTTTTT TGGAACTAGG CTACGCCGTG GCGATTGTGG
GTTACCGAAC CTACCCGGAC GGTACTGTTG TCGACCAAGT TGCTGATCTC CGGGATGCTG
CGGCATTTTT AGCACAAACG CATCCTGCCT GGTGCGAACG TCAAGTCACC GTCATGGGTC
ATTCCTCGGG TGCGCATATA GCCTTACTGT TTTTAGTGGA TCGCTTCATC ACGAGTACAA
AGCTTTCCGT CACTGCTAAT GGTAGCGGAG ACTTCCGTAT CGATTCCTTC GTCGGGTTGT
CGGGACCCTA CGATATTTCG CATCATTTCG ACTACGAAGC AAATCGCGGT GTAGAAGAAA
TGTCGCCACT CAAACCGGCA AATGGATATA CTCGCCAGAG CTTTCGCACA CATTCACCGG
CTCTTCGTCT CCTAGATTCT TTGGCATGCC AAGTTGAATC AAACAGGGTG ATTGACAAGC
TCTTCCCCCT TTTGGTTTTA ATTCACGGTA TTGAAGATGA TACGGTACCT TTCACAGCAA
CTGCTGAGGC TGGACGGATT CTGAGAAGCT GTGGAGCCCT TTGCCAAGAA ATTTACATCA
CTGAGACGAG ACATCAGGAT ATGGTCATGC AGATAATGCT GGGTGGCAAG ACCCTAGATG
CTGTTATTGA CTGGATTCAG TTACTACATC ACGAGTCGCC AGCACCGACG CCAATATATA
AAGTACATGC AAAAA
|
|---|
| Protein sequence | MTSDPNELVT KKSLAIALSA PRAPPSGSTH RAAMLGREVT ENPYHKSLTD TTSPRLQQRL
FRQLRNAYRT AASHAPHPHL PSALDTGDVV TRALGAWLSV ASQNRFRDSG GFRRLVDFLV
VLSAPAIPLS APSAGWNFLM LTKQVKKLRY GLNSLQYIDF FLPYDPAETF TNTRSARRLI
FFVHGGAWGS GEPWMYRLVA GAFLELGYAV AIVGYRTYPD GTVVDQVADL RDAAAFLAQT
HPAWCERQVT VMGHSSGAHI ALLFLVDRFI TSTKLSVTAN GSGDFRIDSF VGLSGPYDIS
HHFDYEANRG VEEMSPLKPA NGYTRQSFRT HSPALRLLDS LACQVESNRV IDKLFPLLVL
IHGIEDDTVP FTATAEAGRI LRSCGALCQE IYITETRHQD MVMQIMLGGK TLDAVIDWIQ
LLHHESPAPT PIYKVHAK
|
|---|
| |