| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45960 |
|---|
| Symbol | |
|---|
| ID | 7200836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 781045 |
|---|
| End bp | 782827 |
|---|
| Gene Length | 1783 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180118 |
|---|
| Protein GI | 219118701 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGAAACATTT CTGCATGTTA GACTACTAAT TACGAGTTAT GCGATTGGCA TTGCACCTTC
ACATCTAGTT GGCCCATCCT GCTTTTTCGC ATCTTCACAC CAGACCTTCT GAACCATGGT
GCTCAAGACT CCCCAAGATT TCGAAGTCCA CGGCTTAGAG GATATTCAGC CTGCGTATGC
TGATTTCCCC GGCAAAATGT ACGCCGGTAC CTTGCCTACA AACAACGGCT CTCGGCGCGG
CGAAATGATG TTTTGGATGT TCGAGCCAGA TACTCAGCTC GTGCCAGAAT CCATGGTCAT
ATGGCTAAAC GGAGGTCCAG GATGCTCCAG TTTCAACTGC GGGATCATGA TGGAACACTC
ACCCGTGACA CAACCCTTGC ACGCGGCGGG GTACTGTTGT CTCAAACCGA CACCGGATCT
CTCGATAAAC GAGCACACGT GGACCAAGGC TACCACAATG CTGTACGTGG AACAACCCAT
CGGGACGGGA TTTTCGTACG GGGATCCTTT GCCCGAAACG GAACGGGACG CTGCCGGAGA
TATAGATGCC TTTTTGCAAA ACTTTTACGG GGTCTTTGAG CACCTCAAAC CCTATGACTT
TTTCATTTTT GGAGAGAGCT ACGCGGGAAT GTTTGTCCCT AGCTTTACCC GCTTTATTCA
TCTGCGAAAT CAAAAAGCGA TTGAGGATCG GGACGAAAGT CGTTTTCTTG TCCCTTTGAA
GGGAGCCGCG CTCGGTAACG GTTGGGTGGA CGGAAAGATT CAAGGTCCCG CGACGATTGA
TTATTCCTGG TGGCACGGAC TTATCGATAA ACCGACCCGC GATGCCTTGC ACACGCAGTG
GAACAACTGC ATGTACCAGC TTGGAACAGA GAACGACGTG GAACCACCAC CCTTTCATCC
CTTCAATGTG CAGGACGATT GCGGTATGAT GTGGGGTATT CTTCAAGCCG CAGGCAATCC
CAACGCCTAC GATATCACGA CCTGGGATCC AAACGTGGAT CAGATTACAT TCACTTCCGA
AGGTTTTTAC AACACGCCCG CGGTGATTGA ATCCTTGCAC GCGCCAACAA ACATAACCTG
GCACGGGTGT CGATGGGGTG AAGGGCGTCG CCGTCTCGTT TCAGCCCAGC AGCTGGAGCA
ACATCGACGT CTCTACATGG ACAACGATCG CCCGCTGTCG GTTGTTCCCT ACATCGCCGA
GGTTTTGGAC GCGGGCATTC CCGTGCTGGT CTACAACGGA GATCGTGACA TGACGACCAA
CATGGTGGGA CAAGAACTCA CACTCAACGC GATGGAATGG AGCGGAAAAG ACGATTGGCT
AGATGCTCCG CGTGGCCTGT GGAAAGTCAA TGACTATCCT GCAGGCTGGA CAAAAGAGCA
TAAAGGGTTA ACCTTCATTG TTGTCTACAA CAGTGGCCAT ATGGTTCCTT ACAATCAAGC
CGCACCGGCC TATGATCTCG TCACGCGGTT TTTGAAAGGC CAAAGCTACA TGGACACCGT
GCTACCCGCG ATACGAATCA AAGCGCTCGA TACCACGGAG GCTAAAGGTC AGACAAACAT
GTTTGAATCC ACCATATTGG ACGCCAGCGT TTTGCCCACG CTGGCGACGT CCACCACCCC
TGCCATCGAG AACACCCTTT TCTTGAATGC TAGTCAATGG GAATTGATAG GAGTTGCCGC
CGTCTCCATG ATTGTTGGTT TTAGTTTGGC CGTGTTCTTT TTGGGCAAAC GGGCAGGGAT
TCGCAAGGGG CGCTACCAGC CGGTCCCCGA CGCCGACATT TGA
|
|---|
| Protein sequence | MVLKTPQDFE VHGLEDIQPA YADFPGKMYA GTLPTNNGSR RGEMMFWMFE PDTQLVPESM
VIWLNGGPGC SSFNCGIMME HSPVTQPLHA AGYCCLKPTP DLSINEHTWT KATTMLYVEQ
PIGTGFSYGD PLPETERDAA GDIDAFLQNF YGVFEHLKPY DFFIFGESYA GMFVPSFTRF
IHLRNQKAIE DRDESRFLVP LKGAALGNGW VDGKIQGPAT IDYSWWHGLI DKPTRDALHT
QWNNCMYQLG TENDVEPPPF HPFNVQDDCG MMWGILQAAG NPNAYDITTW DPNVDQITFT
SEGFYNTPAV IESLHAPTNI TWHGCRWGEG RRRLVSAQQL EQHRRLYMDN DRPLSVVPYI
AEVLDAGIPV LVYNGDRDMT TNMVGQELTL NAMEWSGKDD WLDAPRGLWK VNDYPAGWTK
EHKGLTFIVV YNSGHMVPYN QAAPAYDLVT RFLKGQSYMD TVLPAIRIKA LDTTEAKGQT
NMFESTILDA SVLPTLATST TPAIENTLFL NASQWELIGV AAVSMIVGFS LAVFFLGKRA
GIRKGRYQPV PDADI
|
|---|
| |