Gene PHATRDRAFT_45954 details

Gene Information

• Locus tag: PHATRDRAFT_45954
• ID: 7200831
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 765913
• End bp: 769235
• Gene Length: 3323 bp
• Protein Length: 1041 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180113
• Protein GI: 219118691

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.340544
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACATTG ATTGTGGCCG TGGATACAGG ACAGTGGTCA ACGAACCAAT ACAAAATAGT 
CCAGAATTCG TGCTGACCAC CGCTAATGTA AGTGGATCTG AAATCAATTC TGGGTACGCG 
ACATCTCTAG GATATCTGTT CTGAGTCCAA AATTTACTTA CATCAGGGCC ACTCCCAGTA 
TAATCGCTAT GTTTTTCGGG TTCCCAGAAT TTCAAGATGA TACGGCTCGA AAAGGCGTGT 
ACCAGTTACT GTATACGGTG TGTAAAACTC TGCGCTGACA ACAGTCAACA GAGCGACGAT 
CCCGTCGTAT GTTCATGTTC CTCTTTGGAG ACGAGGGATG TATTACTTCG ATCATGACGA 
GCAATAGCAA TAGCAATACC AATACCACTA CTTCTACTCC TGCCACTTCC GCCTCTATCC 
CGCTAGACCT TACGAGTAGC AGTAGTGCTC CCCGCAGTCA CAATCGTCGC TACTTGTGTG 
CGGCCCCACG TCCGGATCAG TACGACGAGC ACGCGTCGCC AGTGTTGCAA CGTCTGGGTC 
ATACCCGTGC ATCGCGGAAG ACTTTGCTGG AAGCCACGTT GCGGGCCTTG CAAACGCGAC 
ACAATCTGGA ACGGAAAACT GGGCCGGGTA GAAAGTCGAA CGCTGAGCAC GCCATTCATT 
TTTACGAATA TTTATTGGAG TTGGTAGAAA ATGGCGAGGA GGAGGGTGAG GACATCGGGG 
ACGCCGACTC TATTTCGAGC GCTAGTAATA AGGATGAAGC AGAGCACGAG AGAAATGTAG 
AGTCTGTAAA CAAAAATACG CTCAAGGACG AGAATAACGC GACCGAAGCA CAAGAGGATT 
CTGTCAAATC GGAATTAGAC GAAGCCTCTT CAATGGACAC GGCAACCTTT GTGAAAGCTC 
ACAACGACCT TTGCGAAGTG TGTGACGAAG CCGGCGATTT GCTCATGTGT GAAACCTGTA 
ATCTTGTCTT TCACGTTGCT TGTGTCCGTC CTGCCTTGGA AACGTTGCCG GAGCAAGATT 
ACAAGTGCGC GTATTGTGTC CTGTCGACAG AACCGAAGAA TAGTAGACCA CGTAAGCAGG 
CCGCCGCGGC AGTTCGGCTT ATGGCGCGTT TGCGTAATCA GTTTCAACGA AACAAAAGAC 
GTGGACGAAA CGATGCAGGA GACAGTAAAC GCGACAACGA GGACGAGGAC CAAATCGTCA 
GCAGTGATCT GGGCGACAAG CCTTCCGAAG CATCAGGCAA CGAGGAAATA TCGAAGTTAG 
AGCCATCGGC CGGAACGGAT GAGGAGAAAA GCAGTGAAGA AGAGAAAGAC AAAACGAACG 
ATACTAAAGA CACAACGAAA GAAATAGCGG ACCCACGGAA GGTGACAGAA GACAGAACGA 
ATATAGAGGA AGCCACACCG CTTGCTTCCA ACAAAAGGCG TAAGCTGGAG CTCTACAGGA 
TTACTGATGC CTTTTCGACT CCTGAAAATA TGGAAGACGG ACGATCTAAA CGCAATCGTA 
AGCAACCAAT GCTTTACGAC CCTCAGGCGG GACCGGCTCG CAAGTGGCAA TCGGACGAAC 
CTAAGTACTG GAATTCTGAC TCACAGTCAG ACAATTCGAT TTCTGGTGAA AGTGAAACCC 
GCGATGCTGA CGAAAAAGAT GCATTTGGTA CTGTCGTGAA AAAGGTAGGA TCGGCGCGCA 
AAGAAAACGG TGAGATACAC TGCAGCTTTT GTGAAGACGA CCCTTTTATC GAGCTATGCT 
GCTTCTGTGG CTGTCGTGTA TGTTTTGGGA AGCATCATCA ATCAAAACTG TTGTTATGCG 
ACGAATGTGA CGACGAATAC CACACTTTCT GCCTTAGCCC ACCGCTTAAA TCACTGCCAG 
CGTCCAATGC AGAATGGTTC TGCCCTTCAT GCTCCGTTAG CCAACAAAGA CGACAGATCA 
CTACGAAATC GCTGTCGTCA CGTATCGGGA CCCGGGGTGC CATGAGCAAG TCCCCAAGTC 
CAACACGTAT ATCCTCTCGC CAAGCCGCGA CCAAAGCGTC GCACTCGACG TCTTTGACCG 
AACACGTTAA GCGCGGTCCA GGGCGTCCGC GAAGCAAGGA TCGAATTCTT ACAGTGGCCG 
TAGGCAAGAA GCGTGGACGA CCGCCCAAGT CAGCATCGCA AGGCAGCCCA GACAAGAAAC 
GTGCAAAGAC AGAGCCGACA ACGAAACTTT CTTCACAGAC ACCAAAATCG GATGACGGGA 
AAGCACGGAG TAAGTCTTTG GTTGGCGCCG TCTCCGATCA TGACCCGGTC ACAGACTATA 
TCAGCGCCAC GGCTCCAATA CAAGAAGTGA AAATTAGCCG AAGTGGACGT CCAGTCAAGC 
GGGGCAGTTT TCACGACGAA ATTGAACAGC GCGAGCAGCA TCTGAGATCT GACCGGTCTC 
ATCCAATATC ACCGTCGAAA GCTATCACAA ACCAGACATC ATCTACTCCT GCCACCATCC 
CAGCTGAAAT TATTGAGGCC TCAACCATAG CTGATTCTGA ATCTGATTCT TTGAAGGCCA 
CCAAAACGAC TTCTGTGTTA CAGGGTAGTC AACAGGCTTC CGCAAACGCA ACTGCACTGG 
AAAATGCCTC TCCTTCTCCT GTATTTTCGG AACCAGCGTC CCCGCCAGCG CCAATGAACA 
ATAAAGCCAG CAAGGTGTCA GTGAAAGTTT CTGTCTCGAA TCCCACCCCA AATGTGCAAC 
CATCGGTTCG AATTAACACT GTTCCTTCTA TTGCCACTAT TCCTCCCATG GTAGAGCCCA 
CACCCGTGTC CGTGCCCCCT ACAGCGATGA AGCCAGTGTC AGCTCCGATG TCTTCTTCCA 
CAAGCACTTC GTTGCCAACA ACGGGACAAT CTACACTTCT ATCACCCTCT AAAATATCGG 
ATCCCGCTCC TGCAACTAAC AATGTTGAGC CCGCTGCCGT TATTTCAACT GCAGCCATAA 
CTATGGCCAA AGCAGCTGTA CCACAGCCGC TTACAGCTTC TGCCAGCGTA CCACCGCCTA 
TCGCCCAAAA CAAAGAAGTC AAGGTGCCTC GCCGCAAACC TGGAGCGCGA GAGTGCATGC 
AAATCTCTCG GCGATTCGGT GTTAGAGCCA TTCCTCAAAA GTACATGGAT ATTATGACGG 
ATTATTGCAA GCGCGGAAAA GTTGAACATT TGATTCGGAT GCGCGAGCGA TTGGACGATC 
ACTCCCGCTT TCTAGAAGCA CAGTTGGCAG GATTGGAGGC CTTGGTCCTG GAAAAGGGAG 
AATCAAGTGT TGTGGTTCCT TCCATGCCGT CAGGTCCTGA TCGCAAGCTA GAACGCACTT 
TGGGGACAGA GTATGATTTG TAA 

 

Protein sequence

MYIDCGRGYR TVVNEPIQNS PEFVLTTANS TERRSRRMFM FLFGDEGCIT SIMTSNSNSN 
TNTTTSTPAT SASIPLDLTS SSSAPRSHNR RYLCAAPRPD QYDEHASPVL QRLGHTRASR 
KTLLEATLRA LQTRHNLERK TGPGRKSNAE HAIHFYEYLL ELVENGEEEG EDIGDADSIS 
SASNKDEAEH ERNVESVNKN TLKDENNATE AQEDSVKSEL DEASSMDTAT FVKAHNDLCE 
VCDEAGDLLM CETCNLVFHV ACVRPALETL PEQDYKCAYC VLSTEPKNSR PRKQAAAAVR 
LMARLRNQFQ RNKRRGRNDA GDSKRDNEDE DQIVSSDLGD KPSEASGNEE ISKLEPSAGT 
DEEKSSEEEK DKTNDTKDTT KEIADPRKVT EDRTNIEEAT PLASNKRRKL ELYRITDAFS 
TPENMEDGRS KRNRKQPMLY DPQAGPARKW QSDEPKYWNS DSQSDNSISG ESETRDADEK 
DAFGTVVKKV GSARKENGEI HCSFCEDDPF IELCCFCGCR VCFGKHHQSK LLLCDECDDE 
YHTFCLSPPL KSLPASNAEW FCPSCSVSQQ RRQITTKSLS SRIGTRGAMS KSPSPTRISS 
RQAATKASHS TSLTEHVKRG PGRPRSKDRI LTVAVGKKRG RPPKSASQGS PDKKRAKTEP 
TTKLSSQTPK SDDGKARSKS LVGAVSDHDP VTDYISATAP IQEVKISRSG RPVKRGSFHD 
EIEQREQHLR SDRSHPISPS KAITNQTSST PATIPAEIIE ASTIADSESD SLKATKTTSV 
LQGSQQASAN ATALENASPS PVFSEPASPP APMNNKASKV SVKVSVSNPT PNVQPSVRIN 
TVPSIATIPP MVEPTPVSVP PTAMKPVSAP MSSSTSTSLP TTGQSTLLSP SKISDPAPAT 
NNVEPAAVIS TAAITMAKAA VPQPLTASAS VPPPIAQNKE VKVPRRKPGA RECMQISRRF 
GVRAIPQKYM DIMTDYCKRG KVEHLIRMRE RLDDHSRFLE AQLAGLEALV LEKGESSVVV 
PSMPSGPDRK LERTLGTEYD L