Gene PHATRDRAFT_45936 details

Gene Information

• Locus tag: PHATRDRAFT_45936
• ID: 7201015
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 719050
• End bp: 721248
• Gene Length: 2199 bp
• Protein Length: 598 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180103
• Protein GI: 219118670

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACC AGTCGGCTGC CAGAAAGACG CTACCGTCTC TTCTTCGCCA TTTCGAGGGA 
ACGGAACTAA CAGTAGAATT AAAGACGGGA CGGTTGTATC GCGGGACTCT ATCATCTGCC 
GATCAGGCTA TGAATTTGAC CCTCGAGGAC GCTTCTTTAT TACAACGACT CATCGTCAAT 
CAACAACACA AAGGAGCATT TCGACGCGGA AGCTCCAGCG CAGCCGTGCC ATCCACGCTT 
TCCTTGGTGC ACATTCGGGG ATCGACCATT CGATTTATTC ATTTTCCTGA CCAGCTAGAT 
CTGACACTTA CCATTAAGCA GGGTATTGAT CGGTACGTTT TTTGTGATTT TGGTGGATAT 
ATACGTTTGT TTGAGTCTAT CGATCTACCC ACCCACACAC GGATAGTTAT CAGCAATGTC 
TCATGCAAAA GTCCTCTTTT CTTGTATGTC CTTGTCAGAG AGCGGGTGGC ATCGCAAAAG 
TACAAACGAG GAGTCCGAAA GACCGTCGCC AAAAGCTAGG CGCAAACGCA CGCTGTTACT 
TACAAAACAA ATGGCCCATT GGACACCGTT CGTTTGCTCC TTTCTTGTCC CACTAGGCCG 
AAAGTTTGGG AGGAGCTTTT ACCTTAATCG TCTTTGCCGA ATACACACGA CACGCGTTGT 
ACCCGAAGCA ACCAGTAGCT GGAGAATGGA GCACAACTCT GAGCCAGGAT GGGATGAAAC 
AACCACAATA CACGAAGGGC CCTTTACGGT CTGCCCCAAA TGTCACGGCG ACGGACATAT 
CGTTCATCAA GCGAGCAAAA AGCAGAAACT TCGTCATAAG AGGGCCCGCA CCAATGGCGA 
CTACACCGAT ACACCTGCCC CACAACGATT AGAAACTTGT CGAGAATGTG ACTCTTCCGG 
TCTCGTCCAG TCGGATACAG ATCCTCCCGT AGACACAACC TTGCCGGAGA TTGCTGTTGT 
GGGAGGAGGC CTGGCAGGAT TGGCATTGGC TGCAGCATGC CGACACCGCG GAATGAAATA 
TACCGTCTAC GAAAGAGATC TCGATTTTCA TCAGCGATCG CAAGGGTACG GATTGACTAT 
GCAGCAAGCA CAAAGGCATT AAAAGGACTG GGCATTCACG ATAGCTTAGA CAGTGACGGA 
ATTATGTCGA CGAAACACGT CGTACATGAG CCGGACGGTG CGATCGTTGG TGAGTGGGGC 
TTGCGCAAAT GGGGACGATC GGAGAGGGCG AAAAAGCCCA AACGGCAAAA TATCCACATT 
GCGCGTCAAT CTTTGCGGTG GCAACTCTAC AAGGCGGCTG GTGGTCGAAC TGCCAATATT 
GCATGGAATC ACCGCCTTCT CCAGTACAAG CAGAGGGTGG ATGCTCCTGG TTGGGAGCTG 
AAGTTTCAAG TAGATGATCA AATTATAGCA CACAAGGCGG ACTTGATCGT TGGTGCGGAC 
GGACTCCGAT CCCAAGTCCG GCGTTCTCTG ATTGGAGAGG ATCGTACGCC GCTACGCTTC 
TTGGATTGTA TTGTTATACT TGGTATCTGT CCGATCGCCG GTATTTCCCT GGAGGGCCAG 
CAATCCGATC TTTTGGATGG GGAAACTGTA TTCCAGACAG CCGATGGGGT AACACGGATC 
TACATTATGC CCTTTACCAC CACCGCGTAC ATGTGGCAAT TAAGTTTCCC TATGGCTGAA 
GAACAGGCAC TTTCACTGAG CTCGAAAGGG CCATCAGCAC TCAAAAAGGA AGCGATCCGC 
CGTTGCCAGT CATGGCATAC ACCGGTTCCT GACATTCTCT ACTCGACTCC AATCGAACTC 
GTGTCGGGCT ATCCCGTCTA CGATCGGGCG TTGCTTACCC CCGAGCTCCT GCAGGAAACA 
GCATCCGTGA CACTTGTTGG GGATGCCTGT CATCCCATGT CTCCGTTTAA GGGTCAAGGT 
GCTAACCAAG CCTTGCTGGA TGCCCTAGCA CTCGTGCGAA GCATTTACAA GCACTGCAAG 
ACTGCCGGCT CTTACGATAG CAATTCTTTA GAACGGGCGG TAAAGGAATT CGAGGTTGAA 
ATGCTGGTAC GAAGCGCCGT CAAAGTGGAA GCATCCGCCG AAGCAGCTCG GTTCCTGCAC 
ACGGAAATAG CTATTCAAAA GGGCAACGTG ACTCGTGGAG CAGCGAGTCG CAGTATACTG 
ATAAAATCGA ACGAAGAGGA TACGGCTACG ACGGAATGA 

 

Protein sequence

MADQSAARKT LPSLLRHFEG TELTVELKTG RLYRGTLSSA DQAMNLTLED ASLLQRLIVN 
QQHKGAFRRG SSSAAVPSTL SLVHIRGSTI RFIHFPDQLD LTLTIKQGID RSWRMEHNSE 
PGWDETTTIH EGPFTVCPKC HGDGHIVHQA SKKQKLRHKR ARTNGDYTDT PAPQRLETCR 
ECDSSGLVQS DTDPPVDTTL PEIAVVGGGL AGLALAAACR HRGMKYTVYE RDLDFHQRSQ 
GLDSDGIMST KHVVHEPDGA IVGEWGLRKW GRSERAKKPK RQNIHIARQS LRWQLYKAAG 
GRTANIAWNH RLLQYKQRVD APGWELKFQV DDQIIAHKAD LIVGADGLRS QVRRSLIGED 
RTPLRFLDCI VILGICPIAG ISLEGQQSDL LDGETVFQTA DGVTRIYIMP FTTTAYMWQL 
SFPMAEEQAL SLSSKGPSAL KKEAIRRCQS WHTPVPDILY STPIELVSGY PVYDRALLTP 
ELLQETASVT LVGDACHPMS PFKGQGANQA LLDALALVRS IYKHCKTAGS YDSNSLERAV 
KEFEVEMLVR SAVKVEASAE AARFLHTEIA IQKGNVTRGA ASRSILIKSN EEDTATTE