Gene PHATRDRAFT_45934 details

Gene Information

• Locus tag: PHATRDRAFT_45934
• ID: 7201144
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 711751
• End bp: 713857
• Gene Length: 2107 bp
• Protein Length: 627 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002180298
• Protein GI: 219119063

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGGGAACAC TACCATCAAC ACTATCACTT CCACTACCAA CAACAACCCC ACGGGCGATC 
CCGACTCCCA GGACAGCCAA GTCGCGCAAC AGGACGAAGG CAACGATCAC GCCGAACCAG 
ATCCCGTCGT GGAGCCCCCG TCGGACCCCA GTATGCCCCA ACAAGCCGAC GCCGATGGCG 
CCGGCCCGTT GACTCCGTCC AGGCCCGAGT CTTCCTCGTC ACTGCCCGCA CAGTCGGCGT 
CGTTGGGTTC GGACAATACT CGCCGCACAC GCATCCGTCG CATACTGGAA CATCGCCGGT 
TGTTGTTGCA GCGTCTGCGC CAGAGTCGCG CCGCCGCGAA CAAGCGACTG GAACAATCGC 
GGACGGATCA TCCGGAATCG AAGGATGTCT CGGACGAACA GGAATTGGCA GACTTTCGCG 
ATATGGTGCG AGAAGCGACG GCGCTAGCCC GCAAAGTCTC CAAAATGGAC GCTGACGGAT 
CGACGGGAGA AAAACGCACC TCCGTGTCCC TCCGCAAAGG GTCCAGTGTG GGAAAACGCA 
TGAACGCTGC CCTTTCTTCG CTCGTACCGG GAGCGGCGAC GGCCGCTGCT GCCGCGTCCG 
CTGCCTTACC GCAGTCCTCC CACGTTACCT CCTCGCCCAA CCGAACATCC TCTTCGGCCG 
CTCCAGGTCG AACCCTTCCC ACACAGGCGT CCTCTACCGC GACAGCACAA CCCTCGTCCG 
CGTCCGGTCC CGGGAGTCGT CCGCCTATAT CAAAACCTCC CAAAACGGCT GCCGGCCGAA 
CCATGCTGCC ATCCGGGACG CAGCCACAGC ACACCGGCAT AAGTGGTCCG ACTCTACCCC 
CGAATCGACT CGCACAACAA CAACAACAAC AACAACAACA TCCGTCGCCC CCTGTACCGT 
CGGTTGTTTG TCCCGAAGCG GAACTATTGC GAAAAAGACG CAACGAAATT CGCCACAAAC 
TCATTCACTT GGCCAACACT CGTCGAGATA AAGTCGCCAA TGTGTCCAGC AGCGTCACCG 
GCGGTACATC AACTAAAGCA TCATCATTGC CTTCCTTGTC GCACTCGGAA CGCATTGCTG 
CCGTCCAAGG CCCCGGACGG CCGGTTAAGC TGCCCCGGCG GAGGCAGACA CACTGGGACT 
ATTTGCTCGA GGAGATGCGA TGGTTGGCCA CAGACTTTCG GGAAGAGCGC AAATGGAAAA 
CGGCGACCGC CCGTCTAGTA GGCGACGCCG TCGCAACGCG TGACGATCCC GTCCAGGGAA 
AAATGCCGCT TGTACAGATT TCTCCTTTGA CGGCCGCCGG ACCCGGTCTT GGTACTTCGA 
CTGGAATTTC GATAGATGCG ATCGATCAGG CGACTTCATC CAGAGGTAAC GGCGCGAGTG 
AGAAACGCAC ACGCTTTTTG GAAATGATAT CGGCCGAGGA AGAGACGTCG GCCCGACAAG 
TGGCATCTAT TGTTTCTAAT ATGGTAGCCG AACTCTGCAC CGCAACGGTG GAGTTTGCTG 
GGAACACGGG TGTCAACGCG CTTGCCAAAG CTCTCCGTCG ACACCAAATC ACCAGGAGCC 
GTCTGGAAGG CAGAGCCACC GTCGAGACCG TCCAAGCCAT GCAAATGAAC CAAGGTGGGT 
CTGATAGCGA GACGGCACTT GTCCTTGACG GCACGACGAA CACAGGTGTC GAGACGGATG 
TCAATCAGCT AGCCGTGGAA TCGAAAGCGG AAGAGTTTCA GCGAATGTCT AAAGCAGTGG 
ACGAGCTACT GAATAATGTG CGACAACTTC CGGAAACCAA AGCAAAGGCC TCCTCGACAA 
AACTTAAGGG ATTGGATCTG GAATTGACCG TTGCACAGGG GAAAATGGGG GACGACATTG 
AGGCGAAATG GAAGCTGGAT GCGGGGTCAG TGTTGCGGGG TCCCTTGGCT TCCGGAAAAA 
CTATAACTAC TTGCTCGCTG CTTTGGAGGC ATCGGCGAAG TGGACCACAG TTGGTTGTGT 
GTTCGTCGGC AAAATTGGTA AGGGCGGCGG ATGATTTCTT CTGTGGGTGC AATTATACGA 
TGGACCTCAC GACTTTCTTT TCTATGAAGA TTCGGTGGCT GCACGAACTC GGAAGCTTTC 
AAGGTAT 

 

Protein sequence

MPQQADADGA GPLTPSRPES SSSLPAQSAS LGSDNTRRTR IRRILEHRRL LLQRLRQSRA 
AANKRLEQSR TDHPESKDVS DEQELADFRD MVREATALAR KVSKMDADGS TGEKRTSVSL 
RKGSSVGKRM NAALSSLVPG AATAAAAASA ALPQSSHVTS SPNRTSSSAA PGRTLPTQAS 
STATAQPSSA SGPGSRPPIS KPPKTAAGRT MLPSGTQPQH TGISGPTLPP NRLAQQQQQQ 
QQHPSPPVPS VVCPEAELLR KRRNEIRHKL IHLANTRRDK VANVSSSVTG GTSTKASSLP 
SLSHSERIAA VQGPGRPVKL PRRRQTHWDY LLEEMRWLAT DFREERKWKT ATARLVGDAV 
ATRDDPVQGK MPLVQISPLT AAGPGLGTST GISIDAIDQA TSSRGNGASE KRTRFLEMIS 
AEEETSARQV ASIVSNMVAE LCTATVEFAG NTGVNALAKA LRRHQITRSR LEGRATVETV 
QAMQMNQGGS DSETALVLDG TTNTGVETDV NQLAVESKAE EFQRMSKAVD ELLNNVRQLP 
ETKAKASSTK LKGLDLELTV AQGKMGDDIE AKWKLDAGSV LRGPLASGKT ITTCSLLWRH 
RRSGPQLVVC SSAKLIRWLH ELGSFQG