Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45928 |
Symbol | |
ID | 7201140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 694594 |
End bp | 695748 |
Gene Length | 1155 bp |
Protein Length | 359 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180294 |
Protein GI | 219119055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.178958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTGTCTGGA ACGGGAGCTC TCATCGGATA CTGACTGTGT TATACTGTCA TTTGTAGGGA AATACAACAA CTGGTATGGT CCACGAATAT CAGAAAGATG ACGAAAGCAG CGTGAATAGT GCTGACGAAG CCTTGTTCGA AATGCTAGGT ATATTGCCGT CGTTGGCGAT CGGTAATGGC GTCCCAGACG AAGAGGACGA CGAAAACTCA ATGAATGACA AGGGCGGTGC GCAAGCGCTC TCACTCGATC GGTTCGTCCA GCGGAAGGAC GACAATTGGA TAAGGAAAGT CCTGGCTAAC AGCGACAACA TAAATTTACG GCGACAATAC GAAACCACTT CGGTCTGTGT ATTTCCAGAG GCTCTCCGTA TTCCGGCCAT CGAAATGAGG CGTCTCGCAG ACGAGTTGGT ATGGGGTGGA CATATCTATC CGTCCGACAA GACCTACGAG ACGCTTCGAA TATCGAAAGA TGGCTCAATA GAGGAACGAA GGGCTTTGAC GAGAATAGAA AATTTCGTAA ATTACCATTC TGGTTGGAAC GCGCTGTGCA ACGACTACTT GCGTCGACTG GTATCGTTGG CCTTGGGTCA ACCCATGGTC TTGTACAAAG AAAAGCTCAA CCTGAAACCT CCCGGTGGAA GTGGATTCGC GCCCCACCTT GATACTCCCT CGCTCCGTGT GGCGCTGGGA GACAGAGGAC CTCGTGAGTT TTGCACCGTT ATGGTAGCGA TCGACAACAT GACGACCCGG AATGGATGCT TACGAATCGC CAAGGGTGTT TGGAGCGAAG ACCATCATGT CAACACGGTA CAACCCAAAG CAGAAGGTAA CCCAGATGCG GACGGACGAG CTGGAGCCGT TCTTCCTGAG CTAGTGGATC AACTTCAGTT TGAAGATTTA GTGTGTGTTG GCGGGACGAT TGTCGCGTTC AACGGCTGGG CGCCGCATCG ATCGAAAACC AATCTATCCA GCTTTGCCAG GCGTGCTGTG TTTTTGACCT ACACGTTGGC TGCCGAAGGG GACTTTCACG ATGCGTACTA CCAAGAAATG GAGCATTTGC GCAACAAGTG GCGCGACAAA GTGGGACTGC CAACGCAAAT CAGCAACGAT GAACTAATGG AACTGAATGC GCTGAGCACT GTTCCGAGGA CATAG
|
Protein sequence | MVHEYQKDDE SSVNSADEAL FEMLGILPSL AIGNGVPDEE DDENSMNDKG GAQALSLDRF VQRKDDNWIR KVLANSDNIN LRRQYETTSV CVFPEALRIP AIEMRRLADE LVWGGHIYPS DKTYETLRIS KDGSIEERRA LTRIENFVNY HSGWNALCND YLRRLVSLAL GQPMVLYKEK LNLKPPGGSG FAPHLDTPSL RVALGDRGPR EFCTVMVAID NMTTRNGCLR IAKGVWSEDH HVNTVQPKAE GNPDADGRAG AVLPELVDQL QFEDLVCVGG TIVAFNGWAP HRSKTNLSSF ARRAVFLTYT LAAEGDFHDA YYQEMEHLRN KWRDKVGLPT QISNDELMEL NALSTVPRT
|
| |