Gene PHATRDRAFT_45928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45928 
Symbol 
ID7201140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp694594 
End bp695748 
Gene Length1155 bp 
Protein Length359 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180294 
Protein GI219119055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.178958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTGTCTGGA ACGGGAGCTC TCATCGGATA CTGACTGTGT TATACTGTCA TTTGTAGGGA 
AATACAACAA CTGGTATGGT CCACGAATAT CAGAAAGATG ACGAAAGCAG CGTGAATAGT
GCTGACGAAG CCTTGTTCGA AATGCTAGGT ATATTGCCGT CGTTGGCGAT CGGTAATGGC
GTCCCAGACG AAGAGGACGA CGAAAACTCA ATGAATGACA AGGGCGGTGC GCAAGCGCTC
TCACTCGATC GGTTCGTCCA GCGGAAGGAC GACAATTGGA TAAGGAAAGT CCTGGCTAAC
AGCGACAACA TAAATTTACG GCGACAATAC GAAACCACTT CGGTCTGTGT ATTTCCAGAG
GCTCTCCGTA TTCCGGCCAT CGAAATGAGG CGTCTCGCAG ACGAGTTGGT ATGGGGTGGA
CATATCTATC CGTCCGACAA GACCTACGAG ACGCTTCGAA TATCGAAAGA TGGCTCAATA
GAGGAACGAA GGGCTTTGAC GAGAATAGAA AATTTCGTAA ATTACCATTC TGGTTGGAAC
GCGCTGTGCA ACGACTACTT GCGTCGACTG GTATCGTTGG CCTTGGGTCA ACCCATGGTC
TTGTACAAAG AAAAGCTCAA CCTGAAACCT CCCGGTGGAA GTGGATTCGC GCCCCACCTT
GATACTCCCT CGCTCCGTGT GGCGCTGGGA GACAGAGGAC CTCGTGAGTT TTGCACCGTT
ATGGTAGCGA TCGACAACAT GACGACCCGG AATGGATGCT TACGAATCGC CAAGGGTGTT
TGGAGCGAAG ACCATCATGT CAACACGGTA CAACCCAAAG CAGAAGGTAA CCCAGATGCG
GACGGACGAG CTGGAGCCGT TCTTCCTGAG CTAGTGGATC AACTTCAGTT TGAAGATTTA
GTGTGTGTTG GCGGGACGAT TGTCGCGTTC AACGGCTGGG CGCCGCATCG ATCGAAAACC
AATCTATCCA GCTTTGCCAG GCGTGCTGTG TTTTTGACCT ACACGTTGGC TGCCGAAGGG
GACTTTCACG ATGCGTACTA CCAAGAAATG GAGCATTTGC GCAACAAGTG GCGCGACAAA
GTGGGACTGC CAACGCAAAT CAGCAACGAT GAACTAATGG AACTGAATGC GCTGAGCACT
GTTCCGAGGA CATAG
 
Protein sequence
MVHEYQKDDE SSVNSADEAL FEMLGILPSL AIGNGVPDEE DDENSMNDKG GAQALSLDRF 
VQRKDDNWIR KVLANSDNIN LRRQYETTSV CVFPEALRIP AIEMRRLADE LVWGGHIYPS
DKTYETLRIS KDGSIEERRA LTRIENFVNY HSGWNALCND YLRRLVSLAL GQPMVLYKEK
LNLKPPGGSG FAPHLDTPSL RVALGDRGPR EFCTVMVAID NMTTRNGCLR IAKGVWSEDH
HVNTVQPKAE GNPDADGRAG AVLPELVDQL QFEDLVCVGG TIVAFNGWAP HRSKTNLSSF
ARRAVFLTYT LAAEGDFHDA YYQEMEHLRN KWRDKVGLPT QISNDELMEL NALSTVPRT