| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45922 |
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| Symbol | hUfd2 |
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| ID | 7201009 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 677620 |
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| End bp | 681914 |
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| Gene Length | 4295 bp |
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| Protein Length | 1121 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180093 |
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| Protein GI | 219118650 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCTTTGGA ATCCGTATCA GTTCACCAAA GACCTAACTC TATAAAAAAG CCCAGCTGTT
TCTAAAGGCA ACGCTATATT TGCAATAAAA AAGAAAGAAC TCTTGTCCGA ATCATCAAGG
TTGGAAGAGT ATGAGTGGAT TTTTACCCGA TCTGGCGAAC TGGGCCTTGC GCGGGGGCGC
CGGCTCCGGC CGGAACGCGG AAGAGGGAAG CTCCCACGAG GAAGAAAGCC CGCCGGATAA
TACGGGTCCG GTCTTGACGC CGGAGGAAGT GAGGGCACAG CGCTTGGCAC GAATGGACGC
ACTGCAACAG GCGCAACGCC AAGAGCAAGC CGCCAGTGTC TCTCGTTCTA CTGATGGGGA
TGCGTTGGCG TCCCGCGAAG CGCAATCCTC GGAAGGCAAC AACAACAACA ACAACAACAA
CAAGTTGGAA TCTTCCACGG GCAGCGCCAC TCCGCAACCC ATGGATACCG ATGAGACGAG
CTCGTCTCCA CCCATATCGA AACCCACTGA CGAACGGAAT TTGTCCGAAG CGAAGGAACA
GACAAAGAAG AAGGCCAAAA ACGAACCGAT GGATCCCGAA AAGAAACTAC AACGGAACAA
AGAAATGTTG CTGCACAAGA TTTTGGAAAT TACGCTCAAA GGGAGCAGTA TGGCCAAATC
CAACTCGGCG TCAATGGCGC TCAGTATGAA TGCTTCTTCC TCTGCTGTTG TCGTCGACAT
TGGCGACACC GCAATTACAG CACAGACGAT TGCCGAGATT TTAGCAACGC GTCTATCGCT
GCCGGCCATT GATCCGGCCC TCAATACGGT CCCTCCTCCC AAACCCTTAC TGGTTTACCT
AGGTCTGTGT CATCGCAGAG CGTCGGAGGA ACTGAAAACA TTGCGCCAGT CGTCCAAATC
ACCTGACACC GAGATTATGG ACATTCTAGA GGAGTGTCAA CGTCAGGTAG TCAACTACGC
CGCTTCAACT TTGATGGAAC CCGACTTGTT CGAACTGGGT GCTGATGGTG CTCTCCAGCT
TGCCAAATGC TTACTATCGA GCGTGACGGA ACATAACACG GCAATAACCT TTGGTATGAA
TGGGGCGGCG TCATCCTTTT ATCATTTGGT CTGCGACGAA CTCGTACAGC AGGATTCCAG
TGCATTGTTT ACTGCGATCA ATTCAGTGGT GGACTACTTT TCTGAGCTTT TAAGAAAGTG
CGAGTCCGTA GTGGATGGCG TAGAGGGTGC GGACGGTAGT CCTATGCTGA TAGTATCGGC
TTTGGCCTCC ACGTGCCAAC ACAAAAAGGC GGCCGAAGCA GTCTCGCAAA GTGCTTCGTT
TTTGCTCCCG GCCGCAGGAA CACCGGAAGC GGCCCAGATT GTCCGACCAC CAATGCCTGC
CAATATGACT GGTAACAGTT TCTTGCAAAT GCTGGCGGGG GAAGGGAATC GGCCTTACAT
GAAACGCTCC GGACCGGGTC TAGAAAAGGA AACGCTCCTG GGTTTGATTC TGCGGGTCGG
TGCGCCCAAG AACAATACGG CCTTTTCGCC GTCTTCCGTG TTACGGCAGT CACTTGTATC
AATGGAAAAC ACCAATACCA CTCAACGAAG TCAGTTGCGT GCACATCAAG AGGCGTGTAA
AAATCTAGTT CTAAATTTGG TCAAATCAGG TGCGAGCGCG AGGAGTCAAG TGATGCAGTG
GTTTATGGAT GCCTTGGACG TGAACGCGAA TGCGTCAGCA ATGCGACCAG ATCCGTCCAA
AGTCAGCTCT TCGTCGCTGC TACTCAACAT GTCCGTTGTT TTGCTCAAGC TGTGCGACCC
TTTCGTCGAC GACGGAAAGA AGCAACATTT GATTGACCCT GGCTTTGTCT CATCACTCGA
AGCTCACAAT GGCGTTTTCG CAACCAGCGG AGAACACGCC GTCAGTCGAC TTGGAGAGAT
GGATGACAGT CGAATGATAG ATTCATACAG TCCCAAGAAT TCTTTCATCC CGCAATGTTT
CTTCTTGTGT GCCCGGTCGC TGCATTTCGG CATTGTCCCA CAATTATCCT ACCACGAATC
TTTGTTGCGA CACATTTCGC ATCTCCATTG GCAGATTTCT AACCGCAACG GTGATCTACA
AAGCGACCCG CAGTTTGCGC TCATGGTGAG CAAGCAACGA TCCAGCGAAG TTGCGCTGTT
TGAGGAGGAA ATGGTAAAGG ATACACTTCG TTTTGGCAAC TTTGTTGCCA AGGTTTTATT
CGATATGGAT GATGACACAC TTCGTACTAT GCCCGAGGAC TTTGTGAGCG ATATGTGCGA
CATCATTATG GCGATTGCGA AACTCAAACC GAAGATGCTT CGCAATTTGG AGTTCCGATA
CGTGTTTAAA CTGGTGGTCA AGCTCCTATC GGCTAAATAC GCTAGTGTAA GTCTGATGAT
GGCGATTGTC GTTGTCCCTG ATAACATGGC ACATCTAACT TGATCCTCAT TTGATATTAC
AGATGGTACG AAATTACAAT TTACGCGCCA TGCTCGGCGA TGTTTTGTAC GAATTATTCA
TGCCACCAGA GACAGGCGAT CGCCGGGACG TGCCGGCATC GGTGTCGACG GATCTACTTG
CGGGGGGACA AACGTTTGTG CTTTCCGATA CTGCGGCGCA AGAAACTCTT GCTCCATCCT
TATTGCTGCT TTACGGCGAG GTTGAACACA CAGGATACTA CGATAAAATG AGTCACCGCG
CCAAGATTGC TTCTCTAATA AAGTATTTGT GGAACAGTCC GGAGCATCGT CCTGCCTTCC
GTCGGATCAC ACAGGACCGC GCTTCTTTCA TCAAGTTTGC TAACGGGATC ATTAACGAAA
CTAATACCCT AATTGCCACT GTCATGCAGA AGCTTCCGGA AATTCGCGAA GCTCAAGAAA
AGATGAAGAA TCAGCAAGAT TGGGGACGAC TGACGGAAGA TGAACAAAGC CAAGTTTCGA
GCCGTTTGGA CGATAACGAG CGAGAGGTAA AATACGCATT ACCACTGTGC AACAAAACTT
TGCAAATGTT TGGCTACTTG AATACAGATG GCGACATCCG GGAGCTGTTT CTACTGGAAG
AACTGTGTCC TCGTTTGGTG GCCATGCTGT TGCATGTTCT CACAAAATTG GTCGGTGCCA
AAGGACTGGA CCTCAAGGTT GATAATCCGG AACAGTACGA CTTTCGTCCC AAAGAAATGC
TCCGTGACTT GTGCGCCATC TTCAGTCTCT TTGCGTCATC TTCCGTCTTC CAAGTTGAAT
GTGCCAAGGC GGGTTGTGAC CCCAATCTTT TGCGGTCGGC TGTGAAGACC ACTCGCAAGC
TCAACCTGCT GACAGGCGAG TCCATGATCG CTTTCGAATC GTTACCGGAA CTAGTGGAGC
TCGCGAGTCG GACGGTACTG GCCGACGAAG CCTTTTTGGC GGACGCCCCC GACGAATTCT
TGGACGAAAT TTTGTCCACC TTTATGAAAG ATCCCGTGGT TTTGCCGTCT GGTCACTTTG
TGGATCGCTC GACAATCACG CAACATTTGT TGAACGATCC GATTGATCCG TTTAACCGCG
AACCCATGAC GGTGGAAGAT ATTCGCCCCG CGACCGAGCT GAAGGCCCGG ATGGACGCGT
GGTTGGCGGG GAAGAAAGGC TTTGCTCCGT AAGGACTAGA CGTGAGCGCC ACATTTTTTT
GCGCCCACGT ACTGAGCATC AGCAACGCAT TTCTATACAC AGGTAAAGAA CCATTAGAAA
GAGCAACAGA AAAACTATTG GTCTCTTGCT AACGCATCGT GCATAAATGA AGAAAGGGGT
TCGGTTGCGT AGAGAGGGGT TTGTTTGTCG GTATAAAAAC GTAGATTTAG GGAGTCGCCT
TTTTGTTTTC TCAGAAAGGT CACGTAGCCG CTACTTGGAC TTTGCGATTG CGCAGCGTGA
GAACCCGCAG AGTATGGTTG TTGTTGTTGG TATGAGAATC GATCGCTATC GCTGGCGCCG
TATCCGTGTG CTTTGTTTTT TTGGACGGCG ATCCTTTCGG AGTGATCGTA CTCGTACCAC
GGTCCTCGTC CAAATCCGGC TCCACTCCGT GCGACCTCTT GAGATGCACC GACCAGAGTT
CTTCACCGAC GGTGGGCCCG TCGCGTTTGG GTCCTGGGGA GAGCCTGTGC GGCACACGGG
GATCGTCGTC ACGATCCTTG TCGTCGGGTC CCGTTTTTTG CTGACGGTGC AAATGGACAA
GGTACAGCTC TTCCCCTACA CTGGTAGGTT TGGTCGCGGG CGTGGGGACT TTCCGTCCGA
CAAGTTTGGA CTTCTTTGCC ATGGTGACAC AGTGC
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| Protein sequence | MSGFLPDLAN WALRGGAGSG RNAEEGSSHE EESPPDNTGP VLTPEEVRAQ RLARMDALQQ
AQRQEQAASV SRSTDGDALA SREAQSSEGN NNNNNNNKLE SSTGSATPQP MDTDETSSSP
PISKPTDERN LSEAKEQTKK KAKNEPMDPE KKLQRNKEML LHKILEITLK GSSMAKSNSA
SMALSMNASS SAVVVDIGDT AITAQTIAEI LATRLSLPAI DPALNTVPPP KPLLVYLGLC
HRRASEELKT LRQSSKSPDT EIMDILEECQ RQVVNYAAST LMEPDLFELG ADGALQLAKC
LLSSVTEHNT AITFGMNGAA SSFYHLVCDE LVQQDSSALF TAINSVVDYF SELLRKCESV
VDGVEGADGS PMLIVSALAS TCQHKKAAEA VSQSASFLLP AAGTPEAAQI VRPPMPANMT
GNSFLQMLAG EGNRPYMKRS GPGLEKETLL GLILRVGAPK NNTAFSPSSV LRQSLVSMEN
TNTTQRSASA RSQVMQWFMD ALDVNANASA MRPDPSKVSS SSLLLNMSVV LLKLCDPFVD
DGKKQHLIDP GFVSSLEAHN GVFATSGEHA VSRLGEMDDS RMIDSYSPKN SFIPQCFFLC
ARSLHFGIVP QLSYHESLLR HISHLHWQIS NRNGDLQSDP QFALMVSKQR SSEVALFEEE
MVKDTLRFGN FVAKVLFDMD DDTLRTMPED FVSDMCDIIM AIAKLKPKML RNLEFRYVFK
LVVKLLSAKY ASMVRNYNLR AMLGDVLYEL FMPPETGDRR DVPASVSTDL LAGGQTFVLS
DTAAQETLAP SLLLLYGEVE HTGYYDKMSH RAKIASLIKY LWNSPEHRPA FRRITQDRAS
FIKFANGIIN ETNTLIATVM QKLPEIREAQ EKMKNQQDWG RLTEDEQSQV SSRLDDNERE
VKYALPLCNK TLQMFGYLNT DGDIRELFLL EELCPRLVAM LLHVLTKLVG AKGLDLKVDN
PEQYDFRPKE MLRDLCAIFS LFASSSVFQV ECAKAGCDPN LLRSAVKTTR KLNLLTGESM
IAFESLPELV ELASRTVLAD EAFLADAPDE FLDEILSTFM KDPVVLPSGH FVDRSTITQH
LLNDPIDPFN REPMTVEDIR PATELKARMD AWLAGKKGFA P
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