| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45888 |
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| Symbol | |
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| ID | 7200980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 580573 |
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| End bp | 582446 |
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| Gene Length | 1874 bp |
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| Protein Length | 590 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180079 |
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| Protein GI | 219118620 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGAACACAGA ACGTTTCTGT GTTTCAGTAA CGAGTTTTTC CGACTGTTGG GCAAAGTAGT
CCTGTCGTTC GTAGACTGGG AAGAGAACGT GATCGACCAA GATGACCATG GCTATATCCA
CGAAAACGGC GACGACCAAG ATGTCCTCGT CGGCCGAGAT TGCGACGCAA ATCAAAACGC
TGCTGAAGCC TCATAACGAC GAAGGACTGG ACGCCGCTCG ACTCGACGAA CTTCGTAAAG
TCTTTGCCAG CTTGATCCAG TCGAACGAGT TTTCTCTCGA GAGGACACCA ACTCGCAATT
CTTCATTGCC ATTGTCGTCC TCCAGTGTCC AGCACAAATG GCACGCCTTT CTCCGAACGT
CTCACAAGAA GTTTCTGCTC CAATTGTGCG ACCGCGTCGA ATCGGGCAAA CGGACGGCAC
TGCGTACCTT GTGGGGCGTC GTCGCTACCT CGCCGACGCT ATCCAGCAAC AGCGCTTACC
AAGTGGTTTC CACTACACTG CTGCGACTCT TGGTCCGGGT GGTTTCCCGA TTGCCGACCT
GGGACAAGTC TATACACCAC ATGCTGCAGG CCGAGTTTCT CCAACCCTAT CGGGATGTAC
AGTACTACAC TCTGATCGCC ACGGTCACAA TTGCTAACGA AATTTACAAG CAAGGGACGA
GCGTGGAAGA GGATGATCAA GAGAAACAGG TGCAGGCGGA GCGGTTGGTG CAGCTCCTCA
TGCTCATTCC CATTCCCACC TCGCAACAGG AACTAGACAA CGACGACGGC TTGCTGTTCC
CGCCCCCAAA GAATGCCGTA CCGGAACGCC TACACGAAGA CGACAATGCG GCAAGCGACG
ATAGCGGTGG CGATGATGAT GATGATGATG ATGCAACGGT GGCCTCAACG TCTTCAGTGG
AAGATGCCGA CACAAACGAC AAACCCGAAC AACACAAGGA ACCCGCTAGG AAAAAGCGCA
AAACTGTTCA GCGCTTCGCC TTCTCCCAAC TACGGTGTCA TCACCGGGCT TGGTCAAGAG
CCTGGTTGGC CGTCTTGCGT TTACCGCTTT CTACTTCCAG TCTCAAACAG ACCCTCATTT
TCTTGCCTTC GAAAGTCTTG CCCAATGTCC ACGATCCGCT CCACTTTGCC GACTTTTTCA
TGTCCGCGTA CGATCAACCG CAAAAGTTAC ACTCCGTGCT GGCCTTGGAC GGACTGTTTT
TGCTCATCAC CAAGCACGGC TTGGAGTATC CTGGTTTTTA TAAACAACTC TACAAACTCC
TCACACCGAG TGTCTTTTAC GTGAAGTATA AGCCTCGCTT CTTGCGTTTG CTAGAGACAT
GTATCAGTCG CAACGAACTT TTACCGGCGC ATATAGTTGC GGCCTTCATT AAGCGCACAT
TGCGGTGTTG TTTACAAGCG CCACCAGCGA GTATCCTCGT CGGATTGGCT CTTTGCTCCA
ACTGGTTGCG GAAACACGGA GAAACGGCAT GCCTCGTTCA TAGGCTGCCT CCGATTGATT
CCGATGGTGA CGGTAATTTG CGAGACGCTT TTGACAGCGA GACGGATGAC CCGGAACAAG
CCCAAGCCCT GCAAAGTTCC CTTTGGGAAC TGGAGGCCCT TTCGCAACAC TATTATCCCG
CCGTCGTGAC CATGGCAAAA TCCATTGGAC GAGAAGACGA ACTGCAAACC CCCTTGCACG
ACATCACGGA TTTTCTGTCG CACACCTATA AGTCTCTGTT CGAACAGGAA CGCAAGCGGA
AAAGTACGAA AAAATTCAAG CCATCTCTCA CTTTTGTTCA ACCAGAAGGC TTGTTTCTCA
CGGACGATGT ATTCGCTGGC TTCTTGTCGT CGAGGTCATC TCCTGGTACA GCCGAAGAAG
GCACGAATGA ATGA
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| Protein sequence | MTMAISTKTA TTKMSSSAEI ATQIKTLLKP HNDEGLDAAR LDELRKVFAS LIQSNEFSLE
RTPTRNSSLP LSSSSVQHKW HAFLRTSHKK FLLQLCDRVE SGKRTALRTL WGVVATSPTL
SSNSAYQVVS TTLLRLLVRV VSRLPTWDKS IHHMLQAEFL QPYRDVQYYT LIATVTIANE
IYKQGTSVEE DDQEKQVQAE RLVQLLMLIP IPTSQQELDN DDGLLFPPPK NAVPERLHED
DNAASDDSGG DDDDDDDATV ASTSSVEDAD TNDKPEQHKE PARKKRKTVQ RFAFSQLRCH
HRAWSRAWLA VLRLPLSTSS LKQTLIFLPS KVLPNVHDPL HFADFFMSAY DQPQKLHSVL
ALDGLFLLIT KHGLEYPGFY KQLYKLLTPS VFYVKYKPRF LRLLETCISR NELLPAHIVA
AFIKRTLRCC LQAPPASILV GLALCSNWLR KHGETACLVH RLPPIDSDGD GNLRDAFDSE
TDDPEQAQAL QSSLWELEAL SQHYYPAVVT MAKSIGREDE LQTPLHDITD FLSHTYKSLF
EQERKRKSTK KFKPSLTFVQ PEGLFLTDDV FAGFLSSRSS PGTAEEGTNE
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