Gene PHATRDRAFT_45886 details

Gene Information

• Locus tag: PHATRDRAFT_45886
• ID: 7200978
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 575622
• End bp: 577937
• Gene Length: 2316 bp
• Protein Length: 581 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180263
• Protein GI: 219118993

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGCCCCAGC AACAGAAACG AGAAAACCTT CACGAACAGG CCCTAGACTT TGCTTTGCCC 
AGGAGGCCGC ACGTACAAGA AAGCGCTGTG CTTCTTTGAC ACCATGAAGA TTCTAGCTTC 
CGCCACCCGC CAATTTTATC AGAGCAGCCA AGCTCCGTCC CTGCCACACA AAGTGAAGTT 
TGCTGCCTCC GTCGTCCAAC TTCCATGGGA CACTCACAAT TTCAAATCCT CCCTCGTTAT 
CCGGTCGAAA CGCAACTATG CTTCCACCGC TTGGCAACGT ACGCAAAGGG TCGCCTTGCC 
CGAAGTCGCT GGTGATCCTT CCATTATTAA AAGCGCCTTT CGCGAACGCT TGGATGCCGA 
ACGGGCGCAA GCTTTCCTAG GCGGCGGCCA AAAACGAATC GACAAGATAC ACGCCAGGGG 
ATCACTTACC GCCCGGGAAC GCTTGGAGCT CTTGTTCGAT AACGAGAGCT TCCACGAATT 
GGATCAACTC AAGGCTCATC GATGTACCGA GTTTGGTATG GACGAAAAGG AGTTTCCCGG 
TGACGGTATC GTCACGGGAC ACGGAACCAT CAATGGTCGC GTCGTCTACG CCTTTTCCCA 
AGATTTTACC GTCTTGGGTG GATCGCTTTC GGAAACACAC GCCGAAAAAA TGTGCAAGGT 
CATGGACATG GCCATGCGTG TGGGAGCACC GGTGATTGGT CTCAACGACT CTGGCGGAGC 
TCGGATTCAA GAAGGTGTTG ACAGTCTAGG CGGCTACGCC GAAGTGTTTC AGCGGAACGT 
AGACGCGAGT GGCGTGATCC CGCAGATTTC GGTGATTATG GGGCCTTGCG CGGGTGGCGC 
AGTCTACAGT CCCGCCATGA CCGATTTCAT TTTCATGGTC GAAGACACTT CCTACATGTT 
CGTTACGGGC CCGGAAGTCG TCAAGACAGT CACGAACGAG ACGGTCACCA AGGAAGATCT 
GGGAGGTGCC CGGGTACACA CTGCTAAAAG TGGCGTTGCG CATGGATCGT TCTCTAACGA 
TGTGACGGCA CTCCGTTCGA TGCGCCGTCT CTTGGACTTT CTACCGGCCT CTAACGACAA 
AAACACCCTA CCCGTCAAGG AGACGACCGA TCCAGCTGAT CGCTTAGTCC CGTCACTTGA 
ACGCTTGGTC CCGGACGATC CGAATACGCC CTACAATATG AAGGATGTCA TTCGTGAAAC 
AGTCGACAAC GGTGACTTTT TCGAAATCAT GCCCGCTATG GCACAGAACA TTGTGACAGC 
TTTTGCCCGG ATGGAAGGTC ACACGGTTGG TGTCATTGGT AACAACCCTT TAACCTTGGC 
TGGTTGTCTC GATATTGATG CCAGTATCAA AGCAGCTCGC TTTGTTCGTT TTTGCGACGC 
TTTCAACATT CCGCTCGTTA CGTTTGTTGA TGTTCCCGGA TTTCTTCCGG GGACGGGACA 
AGAATACGGC GGTATCATTC GCCATGGAGC CAAGCTTCTG TTTGCGTATG CTGAGGCGAA 
CGTACCCAAG GTGACAGTCA TTACTCGGAA GGCTTACGGC GGTGCCTATG ACGTCATGTC 
GAGTAAGCAC TTACGAGGAG ACTGTAACTA CGCGTGGCCT GGTGCCGAAG TGGCGGTTAG 
TAAGTACAAC TTCTGTTGAA ATTTTATGGT GATGCAGGTT TTTTGCTCAA CGCCAAGTGT 
ACTTTCCATT TCTTGTTGTT TTGCTTACAG TGGGTGCCAA AGGAGCCGTT AAGATTCTTT 
ATGGTGGCAA AGATGTAGAG CAACACACTA AAGATTATAC TTCGCGGTTT GCGAATCCAA 
TGGTCAGTGC TCAACGCGGA TTTGTAGACA ATATCATTGA TCCTCAAGAA ACTCGACGCA 
TCATTTGTAA CGATCTCCGA ATGTTACGCA CGAAGCATTT ACCCAATATT CCTCGCAAAC 
ACTCCAATCT TCCCCTGTAA AGACCATACT ATGGGTATAA GCAGCGTTGT TGCACAAACG 
TCGGAAAACA TGTATACTTT AACAGTTTAC AGTTAGCATC ATTAAACATA AGTTCAATCC 
TATTCTTTCT TTTTGGAAGG TCGCTGATAA TAATAGCGGA ATATTTCGTC TGGAGTCCAT 
CCACGTTTGT AGCGGTTGAC AATGAGCACG TTCACTAAAG TCGTGTAGAC CACACCATGG 
GTCTGCCATC GGCGAACCGA ACACTGCCCC GTCGGCGGAG GAATAATCCG CAAACGTTCG 
GGCAAGAGCT TGGCTCGTTT ACGAAGCAAG TCCATGAGTT CGTAGTCTTC CATTATGGGT 
TGCTCGGGAT AGCCCCCCAC GTGGTGAAAG TATGCC 

 

Protein sequence

MKILASATRQ FYQSSQAPSL PHKVKFAASV VQLPWDTHNF KSSLVIRSKR NYASTAWQRT 
QRVALPEVAG DPSIIKSAFR ERLDAERAQA FLGGGQKRID KIHARGSLTA RERLELLFDN 
ESFHELDQLK AHRCTEFGMD EKEFPGDGIV TGHGTINGRV VYAFSQDFTV LGGSLSETHA 
EKMCKVMDMA MRVGAPVIGL NDSGGARIQE GVDSLGGYAE VFQRNVDASG VIPQISVIMG 
PCAGGAVYSP AMTDFIFMVE DTSYMFVTGP EVVKTVTNET VTKEDLGGAR VHTAKSGVAH 
GSFSNDVTAL RSMRRLLDFL PASNDKNTLP VKETTDPADR LVPSLERLVP DDPNTPYNMK 
DVIRETVDNG DFFEIMPAMA QNIVTAFARM EGHTVGVIGN NPLTLAGCLD IDASIKAARF 
VRFCDAFNIP LVTFVDVPGF LPGTGQEYGG IIRHGAKLLF AYAEANVPKV TVITRKAYGG 
AYDVMSSKHL RGDCNYAWPG AEVAVMGAKG AVKILYGGKD VEQHTKDYTS RFANPMVSAQ 
RGFVDNIIDP QETRRIICND LRMLRTKHLP NIPRKHSNLP L