Gene PHATRDRAFT_45871 details

Gene Information

• Locus tag: PHATRDRAFT_45871
• ID: 7200969
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 521926
• End bp: 525550
• Gene Length: 3625 bp
• Protein Length: 944 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002180065
• Protein GI: 219118591

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAGC AAGTTCAGGC AGCCCTTGAC CAAATGGTCG AGCCTCTGTT GGACCTGCAG 
AATCGAGGTG TCTTTTCCCG GGACGAAATT CGCTCCATCG TGGATCGTCG TCGACAATCG 
GAATACGCTC TACGCCGCCG AGGAAAACTC CGCAAGGCCG ATTTTATCGG GTACATACAA 
GCCGAAACTC AACTGGAAGC CTTGCGGGCT TTGCGTGTGC AAAGAATTAC TCGAGAAGAG 
CGTCGAGCGA ATCGAGGCAA AACGTCGCAG GATGATGCTA AGGACAGCAA TACTTCCGGC 
ACGAGCAAAA TTGGTGACCG CCACATCGTT CAGCTTATTC ATCTGCTATG GACACGTACG 
CTACGAAAAT TCCGCGACGT GAGCTTCTTT CTGGAGTACG CCGAATTTTG TCGATCCCAA 
AAATCGTTTG CCAAACTTGC GACTGTATAC GCCCAGGCCT TGGCTTTGCA TCCGAAACAA 
ACGGGACTTT GGATAGCTGC TGCCTCGCAC GAATTTTTTC AATCAAGTAC GCCGCATACG 
GCTCGAATTC TGTTGCAGCG TGGAATTCGG GTTAACCCCA CATCGCCCGA TTTGTGGTTA 
CAGAGCCTGG TTATGGAGCT ACATTTGGTA CAAAAATTAC GGGGTCGTCG CGATATTCTG 
CGGGGTGCTG GTCGTGGTGG TGAAGAAGAA GAAGATAAAG AATTCTCAGA GCACAAGATT 
GCTCGTTTGC TATACGATAA TGCGATTCAA GCCATTCCCG ATCGTGTCGA GTTTCGTTTA 
CAGTGTTTGG ATCAATGTCG CTTGTTTCCG AATACAGAAG ATTTGCAAGC TTACATTCAT 
ATTTCAATGG AACGAGATTG TTCGTCTCGC CCCGAAGCGT GGATCGCTCG GGCCATGCAC 
GAATGGGAAC GCCATCGAAA GCTAGGAGAG AATGAGAAGA GTAGTATTGG TTTTTTACAG 
TCAAACGGAC TTGGCGATGA TTTGAACCAA CGTCAAGAGG ACAACCCGCA GCGAAAAAAG 
GCTCGAACGC TTCTCCATCA TGAGCAGGAA GCTAGAGACG ATGTACTGAA GGTGATCAAA 
CAGGCTGTGG ATACCCTTTC GTCTCATGAA ATGTATCTGC AAGGAATTCG CTTCCTTCTC 
TCATACATGC AGGAATTAGC TGAAGAATTA GAAGAGAGCG ACGATAGCAA AGAAAAGCTA 
GAACGAAGTC AAAGGTTTCT TTTTCAGCTC TTCGATCAGG CAAAGACCCT TCATTTCGAA 
ACCTCGGACT TAATTCTCGA GCAGGTAGCG TTTTTGGCTC TTGTTGAGTC GGATCAAGAA 
GCTAGCCAAT GCATTCAAAA CTTTGTAGAG AACCATCCTA CCAAGGCTTC GATTGATGTC 
TGGCGCCGCT ATGCTGCAAT GTCACCCGAT CAAGCCGTTG ATATTCTTGA AGAAGCTGCA 
AAGTATATAT CTGTCGAGCA AGAAGCGCAC ATGGTTGTTC TGTTGGAGCT CTTTGGTGCC 
AAACTAGCCA TTCCAGACGA GAAGAGCTTG CCGGTCCTCT TTCAAACGAT ACTTTTGCTA 
GCTCCTGGTT TTGGGGAGAT GAAGGATGTA GAGGACCCAG TGTATGGAAT AAAGAATATT 
TCATGTGCCT GCTTGCAATA TTTGCGATAC GCCTCTAAGC ATCATGGGCT AAACGAAATG 
CGGAGAATTT ATCAGGCTGT CTTGTTCGAG TCCTCTTTGG GAACCTTGGA AGGTGGTGAT 
CCATCCTTGA TAAACATTTT CTTGGAAGAG GCAATGAAGG CTGAAGAAGA ATTCGGCAGT 
AGTAAGGAGA CTCGATGTCA GCTTAGGCGC CTGTGTGACA TCGCGTTGCA GTTGTTTGAA 
AACACCGACG AGGAGGAGAA ATATAGACGG CGAAAGGAAA ACATTCTATA CGGGTAAATA 
CAAGAGGGGG GTTGAGGAGG CGATTACTTT TGTAGCTATG ATCAAGCTGA CGCTAGTGTT 
GCTGTTTGTG TCATAGAAGG CTTCGAACAC CCTCTGATCT CTCTATACAT GGATTGCCCT 
GTTCGGTCGG GACGAATATG GTCCAAATAT TCGATGTTGA TGCACCAGAC TTTTCAGCGG 
AAGCTTTCGA AGTCGCCTAT AGTAAGTTCC GAGTCGTAAA AATTCGCCAC GCTTACAATA 
TGAAGGAACA ACGATCTTTT TCCTGGAAGA ACATTGGTCC AATTTTTGAT AATTTAGACG 
CAAGTGACAA AGAGTCTTGG TGTCTCGAAA CAAATGAGGG TGAGCCCTGT TCTCCGGAAT 
CTTTCCTGCA GTCCAAGCTT GACACGTCTA GGGCATACTG CAGCTTTTTG ATACAACAAG 
ACGAGGATGC TTATAAATCA GCAATGGATT TGCTTCCAAT TTCTGAACTT AGTTGGACAA 
ATTGGTCGTA TGAGCCCGCC CTTTGGATGT TTTTCGGCAG AAACCGGAAG GGCAATGATC 
CTTTGGAAGG ACGTCCAGAA CATACGGATG CCATTTTACA CGACGGAACT TGGCACTATC 
AGTTGTCCGG TGGAAAGGAA TGGTACCTAC GACCAACAAA GGAGCTCTTG AAACATATGG 
ATGGCCATTT AACGAAAGCA GAGCGAAGGC TTTGGAGCGA ATCGAGTCGC GTTTGTGTCG 
CGTGTGAAGA GGGAAGCATC CTCGTGATCA AGTAAGTCGT GGCTTTTGCT AAATCGCTGG 
TTTCGTGTTG TGTATGAAAA CGCATCTGGC TCATGAGTCT ATTATTTAGC ACGAAGCTGT 
GGTTTCATAG AACAGTAATT CCATCTCAAA AGCAACCATC CGTATCTTAC GCCAGAGATT 
TTCGCTTCGA TTTGAATGCT GCATGCATCC GAGATAGTAA GGGAATGACA AATGTAGACG 
GCCTCTACGC GACGAGTGAT ATCGAAGAAG GAACAATCAT TTTTACAGAG AATGATATGC 
CTGAATGCGA GCTTCACCGG TCGTCCACGG ATCCAAACTG TGAAGTCGTA GCGTTGGATG 
ACGGGTCCAG TGCAGTTGTG TCGATGAAAG CTATAACTGC TGGAGAATTC TTCAGTGTGC 
TCGACTCTGA GAGTGAAGAG GAAGGTGAGG TTGATCCTCC TGGATCAACT TAAAAGTAAT 
CGGAATGCTT TCTAAAAGCA TCTCGAAAAG TAGCATATCT GTGTCATCAT TGACAGTGGA 
TATGGACGTC GCTAAGAATC AACGAATCCT TCTCGGAGAA TAAATTGCCA GGCTTCCTAC 
CTTTCACTTG AACATGCTCC CATCGACCCC TAGATCCTAG GCCATCCATT GTCACTACAT 
GCTCAATCGT GCCATTACCG TCAAAAACAG ACTGAACAAC GTTGATCTTA CCATTGCCCT 
TGATTTGGAA GATAGGATCT TTGCGGGGCT CTCCAGAAGC TATTTTGGGC CGACGAAATG 
TAACTCCTTC ACACCATCCA CCGTTGCCCC TCCATACTAT AGTTCCAGAT ATTTCAACAA 
CTACGTTTGC TGGGTTGTAT TCATCTCCCA CGATGCGGAT CGGGACATTG ACTGTCACTG 
TTCCTTTAAT CCAGTAGTGC CCGTCACCGA GCTCTGTAAC ATATATATAT ATATATTAGA 
ATCTGTACTT TTCCGGCCAA AAAAA 

 

Protein sequence

MAEQVQAALD QMVEPLLDLQ NRGVFSRDEI RSIVDRRRQS EYALRRRGKL RKADFIGYIQ 
AETQLEALRA LRVQRITREE RRANRGKTSQ DDAKDSNTSG TSKIGDRHIV QLIHLLWTRT 
LRKFRDVSFF LEYAEFCRSQ KSFAKLATVY AQALALHPKQ TGLWIAAASH EFFQSSTPHT 
ARILLQRGIR VNPTSPDLWL QSLVMELHLV QKLRGRRDIL RGAGRGGEEE EDKEFSEHKI 
ARLLYDNAIQ AIPDRVEFRL QCLDQCRLFP NTEDLQAYIH ISMERDCSSR PEAWIARAMH 
EWERHRKLGE NEKSSIGFLQ SNGLGDDLNQ RQEDNPQRKK ARTLLHHEQE ARDDVLKVIK 
QAVDTLSSHE MYLQGIRFLL SYMQELAEEL EESDDSKEKL ERSQRFLFQL FDQAKTLHFE 
TSDLILEQVA FLALVESDQE ASQCIQNFVE NHPTKASIDV WRRYAAMSPD QAVDILEEAA 
KYISVEQEAH MVVLLELFGA KLAIPDEKSL PVLFQTILLL APGFGEMKDV EDPVYGIKNI 
SCACLQYLRY ASKHHGLNEM RRIYQAVLFE SSLGTLEGGD PSLINIFLEE AMKAEEEFGS 
SKETRCQLRR LCDIALQLFE NTDEEEKYRR RKENILYGRL RTPSDLSIHG LPCSVGTNMV 
QIFDVDAPDF SAEAFEVAYN ASDKESWCLE TNEGEPCSPE SFLQSKLDTS RAYCSFLIQQ 
DEDAYKSAMD LLPISELSWT NWSYEPALWM FFGRNRKGND PLEGRPEHTD AILHDGTWHY 
QLSGGKEWYL RPTKELLKHM DGHLTKAERR LWSESSRVCV ACEEGSILVI KTVIPSQKQP 
SVSYARDFRF DLNAACIRDS KGMTNVDGLY ATSDIEEGTI IFTENDMPEC ELHRSSTDPN 
CEVVALDDGS SAVVSMKAIT AGEFFSVLDS ESEEEGEVDP PGST