| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45826 |
|---|
| Symbol | |
|---|
| ID | 7200941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 396717 |
|---|
| End bp | 397765 |
|---|
| Gene Length | 1049 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180035 |
|---|
| Protein GI | 219118529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0884469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGTTTTGGGA AATTACAGTT ACTATTAGTT GTTACTGTCA GTCAGCAATA ACAAGCAACG
AGCGAACAAC GAAAGACCAC ACCCTCGAAA ATCGCAACAG GGTCTCCGGT TAGACATTCG
TTGCCAGATC AAAATCGAAA TCGTCGCCTA ACACACACAC ACACACACAT CTCCTGACTT
GCCACTCCAC TCGACAATCA CACAATAGTA TGTGGACTGT TCTTCGCACC ACGAGAACGA
CCGCTACTCG ATTCACCCGT CGTCAGAATC AAACCCAGAC TGCGACAGCG GTGGGGACTA
CGACGCTACA GCCAGATCGA TGGATGAGTT CCGCAGCACA GCAGGAAGAT CCACGGGATG
AGGATGGTTA CAGTGATAGT TGTACCGACT TGCGACATTC AACACCTCAA CAACCGGTCA
ATCACTTTGC GACCATGGGA TTGACACCGC AGTTCGTGGT GGACGAGCAG CAGCTCAAAC
AATCTTACAA ACGTCTCATG ACATCACTAC ACCCGGACAA GCACACATTA AAGTCACAAT
CCTCCCAAGA CGAAAGCCAC GACTTGGCTT CGAGAGTAAC CCTGGCGTAC GATGTTTTGC
GGCAGTCGCT GTCCCGGGCA TCCCATTTAC TGGAACTGAA CGGTCGCGGT ATGGAGGACA
CCGCCTCCGG TAAACTCGTG GGCGCGTGCT TTCTTATGCA CGTTATGGAT TTGCGGGAAC
AAATTGACGA AGCCAACGAC GATGCGTCGT TGAAAAAATT GTGGGACGAG AACGAAGTAC
GCAGCCAGCA AGTCTGCGAC GGTCTGGCGG AAGCCTTCGC CCAGGAAGAT TTCGACGAGG
CCTTGCGCCT GACGGGGAAG CTGCAGTACT GGAATCGTGT GCAGGAAACG ATTCGGGAGA
AAATTGGAAG CCTGCACGAT GCCTGAATAT CTTTTTTCTG TTGGACTCGT CTATGCCATT
CCCCCAGAGC CACTTGTTTT CCTATATTGT TCGACTGTGT TTGATCGTAT ATCTAATTTC
TGAATTTATA ATTTTGACAT ACAAGTATT
|
|---|
| Protein sequence | MWTVLRTTRT TATRFTRRQN QTQTATAVGT TTLQPDRWMS SAAQQEDPRD EDGYSDSCTD
LRHSTPQQPV NHFATMGLTP QFVVDEQQLK QSYKRLMTSL HPDKHTLKSQ SSQDESHDLA
SRVTLAYDVL RQSLSRASHL LELNGRGMED TASGKLVGAC FLMHVMDLRE QIDEANDDAS
LKKLWDENEV RSQQVCDGLA EAFAQEDFDE ALRLTGKLQY WNRVQETIRE KIGSLHDA
|
|---|
| |