Gene PHATRDRAFT_45797 details

Gene Information

• Locus tag: PHATRDRAFT_45797
• ID: 7200809
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 304849
• End bp: 306901
• Gene Length: 2053 bp
• Protein Length: 574 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002180212
• Protein GI: 219118891

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGCACCCGAT CCAACACGAA CGACTCAACG ACACAACCGG TGCAATTGAC CCCCCTTCCG 
AGTATTCGTG GCTTGCACTT CGATAAAAGC ACCTCTCGGG TATCGTGACA AACTAGAGCC 
ATTGATTGTT CCGATTACTC CAAACTGGGT GTTGTCTGGT CAAGTACGAC CGACATTGCT 
TCTATAAATT ACTGCGTTGA AACTGCGAAG GATACGTACA TACAGTGCCA ACCATGAGAC 
TTCAATCACA CGAACCTGCT TCACCCCGAA CGAAGCCTGC TAGTCGACGC CGTTCCACAA 
CTCTGGCTTT AGCAGCGTTG TTGTCATCGG CCCTGCTTTC GGTGACATCG GCGCAGTCGG 
TTTCGGTGCC ATTTGATAGT TTTTCCCTGC AATTGCCATT AACCTTTCGG TGCTCTGTTG 
CCGACGGTAC CCTCAATCGT GGGGATCGGG ATTCGGAACA GATCCGCGAT GCGGCCGACG 
CGTGTCTTAC AACGTACGCA GTTTCCGACT GCAATCTAAC TCCTATCTTG GTCCAACTCG 
GCGCGACGCG ATGTGCAGGA GAGGGTCTCG TTCAGATTGC CGGAGGCTAT TTCATCTTTG 
GCAGCGGTAG CACTGTCACC GAAGACCAAG TCGAGACCTG CGTTCGATCA GCTATGGAAT 
CTCCTGTATG TTTGTCTTCT ATTCAAGAAA GGTACAACTA CATCGATGAT GTTACTTTCA 
GCCTTGATAC TACGACCCCG ATTGGAGTGC CAACAGCGTC TCCTTTAGCA GCGCCATCGC 
AGGCTCCCGT GCTGACTCCA TCGATCGCTC CCACAGTCGT AGCAACAGCG CAGCCCAGCA 
GCGCTCCTGT TCTAGCCGCT TCTGTGGCTC CGACGTTGAC TCCCACGGGA CAGGCCAGTG 
CAAGTCCGTC TATCCAAGTG ACTGCAAGTC CGTCGGTATC CCAAGGTGAA ACGCCCCCGC 
CGTCCCAAGG GGAAACGCCT CCATCGTCGT CGGAAACGGC CTCCACTGGG GCCCCTGTCT 
CGGGGACGGC GACTGGAGGC CCCACGGCGG CTCCCAACTC GTCTGGAACC AACGGACCGA 
CGAGTGACGG GGTCGTTGGT CTAGAACGAG AGCCGGTAGC TGCAGATGAC TCCGCTTCCA 
ACGGTGTTAT CGTGGGAAGC GTCTTGGGAG CAACCTTAAT TGCCTTGATT CTAGCGTTGC 
TCCTGTATCG CAAGAAAGAG GACCGAAAGT GGAAAGACCA GACTGCCAAC GACGACAGCC 
TCGATCACGA TGACATCATG ACGCGAAAAC CCAAGAGCCT ATCCGACAAA GATAGCTTGA 
GTCCGAAACC AAGAAGTGCT GGGGTCGCCG CGGCTGCGGC TCCAGTAGGA CTTTTTGGAC 
GTTTGTTTGG AACCAAAGCG ACAGGTTGCG GTGAGGACGA AGAGGACTTG GAAGTTGCTT 
CGGGTGGGGG AATGTTGTTG AACATTTCAA TGGCCGAAAG CAGCTCCACC GCAGGTAGTG 
GCGTGGAAGC CTACCTGTAC CCACCTGCGA GTGTAGAGAG CTTTGAACAA GACAGACGTG 
CGCAGTCCTA CATTCAGAAA GATATGATAG GAAGCAACGA GGATGTGCCG ATGAGTAGAA 
AGCTCAACGG TAGTCCTCCC CGCAGGCTTT TCGGTCTGAC TTATGCATCT AGACTAAACG 
ACGAGGGTAT TCCAGACAGA GAGGAAACCT CGGAAGACGA TGAGGAGGAA GAAGCAGCCA 
AAATGTTTGA ACCGAAAGGA TCATTGTATC ATGAAGATCT TTCTGTAAGC ACGACCAGTG 
ATTCAGATGC CTTCACACCC GCCGGGCGTG TCAACGACGG AGCAAGCTTG TTAGATATGG 
GCGAGAAAAA GCGAAAATAC AACCTGGAGC AAGTGCAACT TGCCGAAGCG CAGGAGCGGA 
AGAGCAGCCC TCGTAACGGA ACTCCACCGT TCTTTTAGCC CTAGAGTGCC GAATGTGTCA 
TGAATGCGTA TCTTTACCAA CAGTGTTATT CATATAGTAG GAAGGATAAA TCGTATAAAC 
GGTTAATGTA TTG 

 

Protein sequence

MRLQSHEPAS PRTKPASRRR STTLALAALL SSALLSVTSA QSVSVPFDSF SLQLPLTFRC 
SVADGTLNRG DRDSEQIRDA ADACLTTYAV SDCNLTPILV QLGATRCAGE GLVQIAGGYF 
IFGSGSTVTE DQVETCVRSA MESPVCLSSI QERYNYIDDV TFSLDTTTPI GVPTASPLAA 
PSQAPVLTPS IAPTVVATAQ PSSAPVLAAS VAPTLTPTGQ ASASPSIQVT ASPSVSQGET 
PPPSQGETPP SSSETASTGA PVSGTATGGP TAAPNSSGTN GPTSDGVVGL EREPVAADDS 
ASNGVIVGSV LGATLIALIL ALLLYRKKED RKWKDQTAND DSLDHDDIMT RKPKSLSDKD 
SLSPKPRSAG VAAAAAPVGL FGRLFGTKAT GCGEDEEDLE VASGGGMLLN ISMAESSSTA 
GSGVEAYLYP PASVESFEQD RRAQSYIQKD MIGSNEDVPM SRKLNGSPPR RLFGLTYASR 
LNDEGIPDRE ETSEDDEEEE AAKMFEPKGS LYHEDLSVST TSDSDAFTPA GRVNDGASLL 
DMGEKKRKYN LEQVQLAEAQ ERKSSPRNGT PPFF