Gene PHATRDRAFT_45771 details

Gene Information

• Locus tag: PHATRDRAFT_45771
• ID: 7200912
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 224341
• End bp: 227935
• Gene Length: 3595 bp
• Protein Length: 947 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179993
• Protein GI: 219118442

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAAATCACGA AGCCTCCGCG CGACCCCGGA ACTATCCGTG TAGAATTCCT GGTGTCTCGA 
ATTCGGATGC GCGCAACAGT CAGCTTTCTC ACGTGAAATT TGCGTTTGCC GTTTTTCCTT 
CCGTGCACCC TTTCATCCGA GATTTTGTTA CCGGACAATT ACTCTTAGTC TCGTACTTGA 
AAGTTGGAAT TCATTTCCCT TGCTGGTGTA TCCAACTACT ACCATGATTC AGTACGATCG 
TTCGCCCTTC GGCATATCGA CGCTCTGTCG CATGCACGGG AGTGCTGTGT ACCGAGCAAC 
GATTCCAGGC TTTGCCTCGG TGATCTTCAT TGTTCTCATT CACGAGCTTT GGTTGGAACG 
TCCTATTTAC CAGGAGAAGG ACAACGAGCT AGGTCATCCC TACGCCATTG GTGTTTTGGT 
TGGCACCATT ACCTTTCTAC TCGTCTTTCG CACTCAACAA GCCTACGCAC GGTACTGGGA 
GGCATGCTCG TCCGTCTACC AGATGATGAG CAAATGGATG GACGCCTCTA GTCACACGGC 
CGTCTATCAT TTACAGTGCG ATCACTACGA CCACATCAGA CCGCCTTCCT TTTACGATTA 
TCCCCACTTG AATGCCGAGT TTCTCACGAG AGACCGCGAA ACTCACGATC CCAATTCAAC 
GGGCGTGATG GAGTCGATGC GCATGCAAAA GCGGGCGACG ACCAAATCGA TCGAACAAAT 
CGAAACTTGC CGACTCGCCC CTGCCAAGCC GAAAAGAAAG GTTTGGGAAA GACGATCTTC 
GGATACCAAA TCCGAGAGTT CCAGTCGAGG AGAGGATACG CCCGTTCCGT TGGAATCAGA 
CCCGCGTCTA GACGGCAACT GGGGAGCGCT CTTCGACGAC AATCGTGCTA CGTTCTTCGA 
TCCCAAATTC CCCGACAGTA TTGATAAAGC TGGCTTTGCA AGTTCGCAAG GCGGAAACAC 
TCCACCACTC TTTCTCCAAG AACTGGCTCA CTTAACTTCA CTGTTGACCG GCGTTGCCTT 
GGCCACGCTC CGCAACGATA TCGAAGGCGC CGAGTCACCC TTGGACATTT ATGAAGCGGG 
ATCGCCCTGG CCAGAAGTAG ATCCGGACAA GATGGCCGAC GCCACATTCT TCGGCGCAGG 
CTTTACCGCC ATGAAGATTT CCAATTTCAT CGGCATCGGT CGCACTCCCG AGGAACGCAC 
CCGTTACAAC GCCTCGCGCC CGCTGGCCGT CCTTGGTGGT GTCTCCGCCG CAGAAATTCG 
ATTTCTGCAA ATGGCTCGAG GCCCCTACGC CAAAACACAG CTGTGCTGGT CCTGGCTCTC 
GGAATTCATC ACTCGAGAGC ATTTGGCTGG TTCCACCGGG AATGTTGGAC CGCCCATTAT 
CAGTCGTATC ATTCAGTTTC TGGGCGACGG GATGATCTAC TACAACCACG CGCGAAAAAT 
CACGTTTATT CCGTTTCCGT TCCCTCACGC CCAGCTTTCC GTAGTCTACG TGTTGGTCAC 
AGTTCCGGCA GTGGCCTTTC TAATGGATCA GTACACGGAA AAGCTCTGGG TGGGTTGCAT 
TTTGACCTTT TTGACCGTGA CCGCATTGGC GGGTATTCAC GAAGTCGCCC GAGAATTGGA 
AAATCCGTTT AGGAATGTCC CCAACGAGCT CCCTCTAGTG ACGATGCAAG CGCAGTTCAA 
CGAAGCTCTC TTGACCATGT ATGCCGGCTT TCACCCGGAC AACTTCTGGA AGGAGGACGC 
CGATCGCTAC TCGAAAAAGA AGAAGCGGAC GACTGCAAAA AAATGTGTGC AAAGCAATGG 
CGTCAATTCG TCGGAATCGT GTCCACGACA GGCCCCAGAA GGGGAGGCAC CGGAGACGAG 
GACAAACCAT GAAAAGTCTC TGGACGCAAA GATACAGGAA TTGCTGGAGA AAATCGATCA 
GCAAGGGTCG GAACTTGCTA GATTACGGGC GACGGTGGTT TCCGGCATAA AAGATCCCGA 
GAGTCAGCCG GTGGAATATC ACCGGCAGGC GGAGGAGCAA AGTGTTAGAT AGTGAAGAGC 
TCACTCGACA ACGCCAACAG TCGATCTTTG TGTATAGTAT ACTATTTTCA CTCACGGTCA 
ACTCTTTTTA CACCACTAAG TGTAGCTAGC AGAGTTGAAT CCATGTTTGG CCGTTCGTGG 
GTACAGTGAT TAGTATTGCC TCTGCTATCG TTTACCAATG GCATGTAAGA CATTATACGC 
ACCCACATTG CTACAGTCTC TTTCTGTCGC AAAGATCTCA CTGGACATTT TTCTAGCTAA 
AAGTGCTCGG AATGGAAATT TTCAGAACAT GTACGTACCT GCCATTTGAC GAAATTGACA 
AGTGAACTTA GACGGACCCG GAAGGTGTCG AAGCAGGTCA TGGTGGATTT TTTTGGAAAT 
TCCGTTGGGT GTTATCACAA CTTTAAGTTA CATTAGTGAA CAACGCAGAT TCTTACAGTA 
CATGGCACGA TGATACCTTC TGTTTCAGCT TTTGCCAATC TCGGGAAGCA TTTCTGGGCT 
ACTGCAACGG GCCTATTTCT GGCGCTAAGC GGTATGGCAT CTTTGTTCCA CGAAGGGCAA 
ATTATTTTCA GTTTAAGTAG TGATAGCCCC TTCGCTGCGA CACACGGCGT CGATGAGCTT 
CATCCAACTT CAGCAATATC TGAGATGAGG TCTGCTTCTG ATAGACAAAT GCAACAAAAT 
AAGACGGAGA CTGAGCTCTT GGTTTCATAC AGAAACAGGT TCGAAGTAGT ACCTGAAATC 
ACTCGACCTT TAGTGGAAAC AATCCCTGGC GATTCGACGG CACCGACCAG CCGTGCTTTC 
AACACAAGTC AAGCGGACCG GGCTGATATA AAAGAAGAAC CAGGTCGAAA GCAAAATTGG 
AGTCGCATGA TCATACCCTG GCCTGTTTTT GTTTTAAGTT TACCGAAATC TGGGACATCC 
TCGATCTCGA GTTATTTCAA CTGTGGACTA AAGCATAGGC AGTCTGCTCA TCATTGGGGG 
AAGATGAACA GTGGAAAACA AAATAAATTG GGATTTTGTT TTCTGGATAA CGTCAGGGGC 
AACAGGCCAA TGCTAAATGG CTGTGGAAAG TACAAGGTCT GGGTGGATGC CGGGGTGCCG 
TCCAGTCGGG GGAAATGTTT CTACCCCGGG ATGCATGGTC TTGACAACAT TGTAACTAAT 
TATCCTAACG CAACCATAGT CCTCTCCACG AGGGAAGCCC TGAACTGGGT GCGCTCTGTC 
AGAAAGTACG CGGGAGGAAC CCTGATGGAC AAGTGGCAAC GGAACTGTCC CGACTTTCCA 
AACGCAAACT CGACAGAGTT GGAGTGGGCG GTCTTCTACG ATGGCTACAA CGATTCCATC 
CGGAAATTTT CTATTGCGAA TCCGTCTCTC ACATTGGTTG AAGTCAACCT AGAAAGCAGC 
TTAGCCCCAA GTGTGCTCAA AGAAAAAGTA GGTTTCCGAA AGAATTGCCT TATGCATTGT 
CGACCTCATA CAGGCTGTGA AAAACTGAAT GATACCTTTC CAGTCGGAAT CCATAGCGCG 
ACTAGAGATA CATCAGTACA TTCGGTGGAT GGAGCCAATT AATCAAGACT TCCAA 

 

Protein sequence

MIQYDRSPFG ISTLCRMHGS AVYRATIPGF ASVIFIVLIH ELWLERPIYQ EKDNELGHPY 
AIGVLVGTIT FLLVFRTQQA YARYWEACSS VYQMMSKWMD ASSHTAVYHL QCDHYDHIRP 
PSFYDYPHLN AEFLTRDRET HDPNSTGVME SMRMQKRATT KSIEQIETCR LAPAKPKRKV 
WERRSSDTKS ESSSRGEDTP VPLESDPRLD GNWGALFDDN RATFFDPKFP DSIDKAGFAS 
SQGGNTPPLF LQELAHLTSL LTGVALATLR NDIEGAESPL DIYEAGSPWP EVDPDKMADA 
TFFGAGFTAM KISNFIGIGR TPEERTRYNA SRPLAVLGGV SAAEIRFLQM ARGPYAKTQL 
CWSWLSEFIT REHLAGSTGN VGPPIISRII QFLGDGMIYY NHARKITFIP FPFPHAQLSV 
VYVLVTVPAV AFLMDQYTEK LWVGCILTFL TVTALAGIHE VARELENPFR NVPNELPLVT 
MQAQFNEALL TMYAGFHPDN FWKEDADRYS KKKKRTTAKK CVQSNGVNSS ESCPRQAPEG 
EAPETRTNHE KSLDAKIQEL LEKIDQQGSE LARLRATVVS GIKDPESQPV EYHRQAEEQM 
ISIASAIVYQ WHLKVLGMEI FRTSFANLGK HFWATATGLF LALSGMASLF HEGQIIFSLS 
SDSPFAATHG VDELHPTSAI SEMRSASDRQ MQQNKTETEL LVSYRNRFEV VPEITRPLVE 
TIPGDSTAPT SRAFNTSQAD RADIKEEPGR KQNWSRMIIP WPVFVLSLPK SGTSSISSYF 
NCGLKHRQSA HHWGKMNSGK QNKLGFCFLD NVRGNRPMLN GCGKYKVWVD AGVPSSRGKC 
FYPGMHGLDN IVTNYPNATI VLSTREALNW VRSVRKYAGG TLMDKWQRNC PDFPNANSTE 
LEWAVFYDGY NDSIRKFSIA NPSLTLVEVN LESSLAPSVL KEKAVKN