Gene PHATRDRAFT_45770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45770 
Symbol 
ID7200911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp222780 
End bp223734 
Gene Length955 bp 
Protein Length288 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180195 
Protein GI219118857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAGGCGATCA TTTTTACGAC ATATCCTCAT TGTCGATACT TTTCTCTACC TGATCTTGCT 
GGGTGTTCCT TTTACGCGCT TCGTGCACAT GAGTATAAGC TCGTCACGCG CTTCGTCGAG
TCTGCCACAA ACAAGCGAAA CAGCCGACGG CATCACCACA ACGCACCTTT CCATGCAGAA
ACGAAAGACT GGCATTTTGC CAATGACCGA AGCCGATCGG AACGGCCGCA ATGCTGCGTC
CAATAGAAGA CTTCGACACA AACATGTCCA GACATCGGAT CTCGTGGGTT TGGGGAAACT
GATGCTTGGC ATTCTGGCTC TCGGATTGAT AGTTGTGGTC TGGCAACGAA AGTCTCTCGT
CAACGAACAG GAAATAGGCG GTCCCATCAA GGTGGGCAAC GCGCCGGTAG ATATAGACGA
TTCCCTACGC GAGCATCCCC TTCATCGGTA CGAATCGCTA CAGTATGCAC TTGATAACTC
CAAGATTGTT GCCCTTTACT TTGCGGCGAG CTGGTGTCCC ATGAGTACAC CCGTGACCAA
TCTGATTCAC GATTATTTTG ACGATATTCT GTTGCCACCA CCCCCTACGA ACAATGCTGC
AAGCAACAGA AGACTGGCGC AACGACATGG ATTATCCCTT GTTCATGTAT CGTCTGATGT
GGACGAAGAG TCTATGCAAA AGTACATTGG AAAGAATTGG ATGGCTGTTC CCTACAACAG
CCCGGATCGA AACGCCCTTA AGGAACATTT CAAAACCTGT GCAAAACGCG AACTGTCCGC
CTTGGGATTC AAACGCAAGC ATGAAATACC GACCCTTATC GTAATTTCGG GGACGTCACA
CGAAGTGTTG ACCTTCGATG GTGTACGCGA TGTCCGAGAG TATGGCGCCC AAGCTGTCGA
TACGTGGATG GAGTTGGCCA GTCTCTCCGA TGCGTTGTCC TCCAAGTTTA TATAG
 
Protein sequence
MSISSSRASS SLPQTSETAD GITTTHLSMQ KRKTGILPMT EADRNGRNAA SNRRLRHKHV 
QTSDLVGLGK LMLGILALGL IVVVWQRKSL VNEQEIGGPI KVGNAPVDID DSLREHPLHR
YESLQYALDN SKIVALYFAA SWCPMSTPVT NLIHDYFDDI LLPPPPTNNA ASNRRLAQRH
GLSLVHVSSD VDEESMQKYI GKNWMAVPYN SPDRNALKEH FKTCAKRELS ALGFKRKHEI
PTLIVISGTS HEVLTFDGVR DVREYGAQAV DTWMELASLS DALSSKFI