| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45764 |
|---|
| Symbol | |
|---|
| ID | 7200785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 177548 |
|---|
| End bp | 182359 |
|---|
| Gene Length | 4812 bp |
|---|
| Protein Length | 1603 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179989 |
|---|
| Protein GI | 219118433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCT CGCAAGCCCA ACTGCAGCCA CAACAGGCGC CGCCGGTTGC CGCCCCGCTT
CCGTCAGCGG CGGCGCAACA AGGATCGGCG GCGGCGCCGG CAGTGTCGCA CTACTCATCA
CAGCACTTGT CACAGGTGCC GGCTGCGCAA CCCGGTCTGG CGCCGCAATC GCAAGGAGTT
GTTCATCAAC AGCGCCCAGT GTCGCAAGGT ATAAACTATA CGACGCAAAC GTCACAATCG
CAGACGCCGG CTCAGCAGCA GGCTCCCCCG CAACAGCATT TCCCTCACCA AGGACTCAAC
GGCGGATGGC AAAGCGATAA GGACTATCAA GAGCGCCGGA AAATGATCGC CAAGATTGTG
CATCTACTGC AACAGCGCAA GCCGAATGCT CCGCAGGAAT GGTTGAAGAA ACTTCCGCAA
ATGGCGAAAA GATTGGAAGA GTCGCTGTAT CGCACAGCAA CGTCCTTTGA AGAGTATAAC
GATGCCAACA CGTTGAAGCA TCGTTTGCAG CAGTTGGCGG TGAACATTGG CCAAAAGACC
AAGAAGCTGC AACAACAGCA GGCGTTGTTG GCTCAACAGA GACTACAGCA GCAGCAACAA
CAACAACAGG TTCGGCAGCA GTCTGATACA ACTCAGTACA CTCCCCAGGT ACCGCCATCT
ACTTCACAGC AAGCATTAAT ACAGCCGCAG ACGCAGCAAG GTCTAATACC TCAAGTGAAG
AGCGCCGCGC CACCTGCGTC ACAAGTACAA GGTCAACGGA TGGTAAACAT GTCGGAAATC
AACCCGATAA TGGGACAACC GACCCAACAA CAGCAAAGCG CCCCAGCTCC ACAACCGCCG
CCTCTCCAGC AAGTGCAGTA CACACAAAAG CCGCCCGTGG CCCCCATTTC AGCCCCCACT
CCTCAGGCTC CCGCACCGGC CGCAAACGGC CCCAATGGCC AGGCTTCTGG TCGACAAGTT
TCGGATCGTC AACAGGTGTT ACGCCATCAA CAGCAACGGC TGCTGCTACT GCGACACGCT
GCCAAATGTC AGCATGAAGA CGGAAAATGC CCAGTAACGC CGCATTGCGC TGGGATGAAG
AGATTGTGGA AGCATATTGC CGAATGCAAG GATCAAAAAT GTCTTGTACC GCATTGCGTC
AGTTCCCGGT ACGTGTTAAG TCATTATCAC CGATGCAAGG ACGTTCGTTG TCCAGTGTGT
GGCCCAGTAA GGGAAGCCAT TCATCGAAGC CACGAAAAGC AGAAACAGAT GCAGGCCCTA
AAACAGCGAC ATCAGCAGGC CGTACAGCAA CAGGGCCAAC CTCAGAATGC GACTTCAGCG
CCCGCCGCTA TCGGTGCTTT GCCAGTCCCC GCTCCTCCTG GACATAGTTT GGAACCTGTT
ACCAAGAAAC AGCGCACCGC GCCCATTACA GCTTTGAGAG CTCCGATCAT GCCAGTTCAG
CGACTTCAGC AGCCACCAGG TACTCGTCCG GCCGTTTCGC ATCCAACCAC AGTAAGACCT
GGATATACCG GAAGTCAACC TCCCATCACT TCTGGTCCTG GTGGTCCACC GGTTGCGCAA
GTACCTGGCC TAGCGTTTGC GAACGGACAA GTAGTAATGC CGAAACATTC AGGACCAAAG
CCACAAGAAG ATCACACTTT GATCAACTGC TTCTCTGTCC AGCAAATTGA GACGCACATA
TCTTCCTTGA GCAATGGGTT GGTCCTGCCT CCGCAGAAAT TGAAAACGAA AGGATTGGAC
GCTCTTAAAA CGCTGCAGTC GCACCAACAT GCGTGGGTAT TCAACACTCC AGTGGATCCC
GTGGAACTCG GCTTGCCGGA CTACTTTGAG GTCATCAAAA AACCAATGGA TCTAGGGACA
ATAAGGAAGA AGCTCGAAAA TGGCGTTTAT CAGAGGCTGG ACGACTTCAA AGAGCATGTA
CTGCTTACAT TTGATAACGC CATGATGTAC AACCCGGAGG GTTCGGTTGT GTATAACATG
GCTAATGAAA TGAAGGTAAA GTTTCAGAGC GACTTCGTAA AGCTCATGGA ACAACTGAAC
GCCGAAGAAG ATGTCAAGCG AAAGAACGGG GAGGCCTGTT GTTTATGCGG ATGTGAAAAG
CTGCTATTTG AGCCTCCTGT ATTTTATTGC AACGGAATAA ATTGCCCTTC GAAGCGAATT
CGGCGAAACA GTTATTACTA CATTGGAGGG AACAACCAAT ATCACTGGTG TCACCAGTGC
TATCAAGAAC TCCGCGACAA TTCAACCATT GATTTAGGCG ACCTTTCCGT TAAAAAAGAA
AGTCTCGTGA AGAAGAAGAA TGACGAGGTG CACGAAGAGA GCTGGGTACA ATGCGATCGT
TGTGAAAGAT GGGTTCATCA GATTTGTGCT TTATTTAACA CTCGGCAAAA TAAGGATCAG
CGATCCGAAT ACGCTTGTCC GAAGTGTACA ATTGACGAAC GAAAGGCAAA AGGCGAGCTT
GAGGCAAAAT CGTCAACTCC GATGGCAGAG GACCTCCCTC GTACCAAGCT GTCCGAGTAC
TTGGAGAATC ATGTGCGTGA GAAGGTCGAT GAGTTCGTTG AACAGAGGTC GCAGGATATG
GTTGTTGCTC AAGGTTGCTC TATTGAAGAA GCCAGAAGCA AACTTAAGAT GGGAGGTGCA
ATCACTATCC GACAGGTAAC TTCCATGGAC AGACGACTTG AGGTCCGAGA TAGAATGAAG
CAACGCTATG CATTCAAAAA CTACCCGGAA GAATTCAATT TTCGGTGTAA ATGCATCGTT
GTCTTCCAGA ATTTGGACGG CGTTGATGTT GTTTTGTTTG GCCTTTACGT ATACGAGCAT
GATGAGAAAA ATCCTGCCCC CAACAAGCGG GCCGTCTATG TGTCCTATCT CGATAGTGTT
CATTACATGA GACCACGTGA TATGCGTACT TTCATTTACC ACGAAATTTT AATATCTTAT
CTTGATTACG TCCGGAGGCG TGGATTTTCG ACTGCTCACA TTTGGGCTTG TCCGCCGCTT
CGCGGAGACG ACTACATCCT TTACGCAAAA CCAGAGGACC AGAAGACCCC GAAAGACGAT
CGATTGCGTC AGTGGTACAT AGACATGCTG ATTGAGGCCC AAAGGCGAGG GATTGTTGGG
AAACTTACCA ACATGTACGA CCTCTATTTT TCCAACGAGA AAAACGATGC AACGGTTGTC
CCCTACATGG ATGGTGACTA CTTTCCTGCT GAGGTTGAGA ATATCATCAA GGATATTGAG
GAAGGCAAGA CGGGAAAGAA AGGCAGTTCG CAAGGCAAAA AGAAAAAAGA AAAAGCCAAA
CAGAAGAAGA AGTCAGGTCG TGGCGGAACT CGGTCTACGG GATTGGATGA AGACGCTCTT
AAAGCGAGCG GATTTCTGCC ACCCGGTACT GATTCAAAAA GTCTAGAAGA AGGCGCTCGA
GACTACGTCA TGGTGAAACT TGGTGAGACC ATCCAGCCCA TGAAGGAAAG TTTCATTGTG
GCTTTCTTAG GCTGGGAAGG GGCGAAAGAG GGAGACATGG TTGTTCCCAA TGAGATCCAA
GAGCACCGTG ACCTGCATGA GATCACTTGG AAACTTAAAA GCAGTAGCAC CAAAGCTGAT
ACAGTGGAGA CTATCGAGAA CGAAAGCGAT AGGCAACAGG ACGCCGAGAT CAAAGATTCT
AGGGATAAAA AAGGGGACAG TTCGATAAAG TTAAACGGTA CTACTTCAAA GAAGCCGGAT
GACACGTCCT CAAGCTCAGG AAACATCGAA GACACTGCCA GCACACATAG GGCTCATGTT
GACACACCGA TGGAAGGGAT TGTAAAAAAT GAATTTACCG AAACCAATGG AATTTTGCAA
TCCTCACCTC AAGAGAATAA AGACTCTGAA TCCATCAACG CTCCTGCGCT TCGTGTTGGA
ACTGAGGCTA TTGATCGCCC GGATGCTCCG CAGTCCGCGA TAACTGCAGC ACCAAACACT
ATTTCTATCC GAGAGGGAAA ATTCGCTGCT ATGGCGGCCC GGAAACGTGA TAGAGAAGGG
GAGCCGAAAG AGCCCGAGGA GGTGGAAAGT ACAAGTGAGA AGACGAAGGA AGAAAAGCTG
ACTTCCATAA CAGTGACTGA TAGCAAGGGC CGTACTGTGA AAGTTTTGGA TGACGACGAG
GAGGAACTTG ACTGCGAGTT TCTAAACAAT CGACAGGCGT TCTTAAATCT ATGTCAAGGA
AATCACTACC AGTTTGATCA CCTGCGCCGC GCAAAGCACT CCTCCATGAT GGTTTTGTGG
CACCTTCACA ACAGGGATGC ACCAAAATTT GTGCAGCAAT GTGCGACTTG CTCCAGAGAA
CTTCTTACCG GATATCGCTT TAATTGTCCT ACATGTGGGG ATTTCGATCA GTGCCAAGAC
TGCATTTCCA ACCCGAAGGT TCCTCGGCAC CCGCATCAGC TCAAGCCTAT TCCGGTGGCC
AATGCGCAAC AAAACGAATT GACGGAAGCG CAACGCAAGG AACGACAGCG CAGTATCCAG
CTTCATATGA CTCTTTTGCT GCATGCTGCT ACGTGTAGCT CGCCGAAGTG TCCGTCAGCC
AATTGTACAA AGATGAAGGG TCTTTTAAAG CACGGCGCGC AATGCCAAGT GAAGGCCACT
GGCGGTTGCA ACGTATGCAA GAGAATATGG GCTTTACTGC AAATTCATGC TCGTCAGTGC
AAAGCGAAGT CTTGCCCTGT TCCGAATTGT ATGGCAATCC GTGAAAGAGT TCGCCAATTG
AAAAAGCAAC AACAGGCGAT GGATGACCGT CGTCGCCAAG AAATGAATCG AGCTTACAGG
GGGAAGCGCT AA
|
|---|
| Protein sequence | MQASQAQLQP QQAPPVAAPL PSAAAQQGSA AAPAVSHYSS QHLSQVPAAQ PGLAPQSQGV
VHQQRPVSQG INYTTQTSQS QTPAQQQAPP QQHFPHQGLN GGWQSDKDYQ ERRKMIAKIV
HLLQQRKPNA PQEWLKKLPQ MAKRLEESLY RTATSFEEYN DANTLKHRLQ QLAVNIGQKT
KKLQQQQALL AQQRLQQQQQ QQQVRQQSDT TQYTPQVPPS TSQQALIQPQ TQQGLIPQVK
SAAPPASQVQ GQRMVNMSEI NPIMGQPTQQ QQSAPAPQPP PLQQVQYTQK PPVAPISAPT
PQAPAPAANG PNGQASGRQV SDRQQVLRHQ QQRLLLLRHA AKCQHEDGKC PVTPHCAGMK
RLWKHIAECK DQKCLVPHCV SSRYVLSHYH RCKDVRCPVC GPVREAIHRS HEKQKQMQAL
KQRHQQAVQQ QGQPQNATSA PAAIGALPVP APPGHSLEPV TKKQRTAPIT ALRAPIMPVQ
RLQQPPGTRP AVSHPTTVRP GYTGSQPPIT SGPGGPPVAQ VPGLAFANGQ VVMPKHSGPK
PQEDHTLINC FSVQQIETHI SSLSNGLVLP PQKLKTKGLD ALKTLQSHQH AWVFNTPVDP
VELGLPDYFE VIKKPMDLGT IRKKLENGVY QRLDDFKEHV LLTFDNAMMY NPEGSVVYNM
ANEMKVKFQS DFVKLMEQLN AEEDVKRKNG EACCLCGCEK LLFEPPVFYC NGINCPSKRI
RRNSYYYIGG NNQYHWCHQC YQELRDNSTI DLGDLSVKKE SLVKKKNDEV HEESWVQCDR
CERWVHQICA LFNTRQNKDQ RSEYACPKCT IDERKAKGEL EAKSSTPMAE DLPRTKLSEY
LENHVREKVD EFVEQRSQDM VVAQGCSIEE ARSKLKMGGA ITIRQVTSMD RRLEVRDRMK
QRYAFKNYPE EFNFRCKCIV VFQNLDGVDV VLFGLYVYEH DEKNPAPNKR AVYVSYLDSV
HYMRPRDMRT FIYHEILISY LDYVRRRGFS TAHIWACPPL RGDDYILYAK PEDQKTPKDD
RLRQWYIDML IEAQRRGIVG KLTNMYDLYF SNEKNDATVV PYMDGDYFPA EVENIIKDIE
EGKTGKKGSS QGKKKKEKAK QKKKSGRGGT RSTGLDEDAL KASGFLPPGT DSKSLEEGAR
DYVMVKLGET IQPMKESFIV AFLGWEGAKE GDMVVPNEIQ EHRDLHEITW KLKSSSTKAD
TVETIENESD RQQDAEIKDS RDKKGDSSIK LNGTTSKKPD DTSSSSGNIE DTASTHRAHV
DTPMEGIVKN EFTETNGILQ SSPQENKDSE SINAPALRVG TEAIDRPDAP QSAITAAPNT
ISIREGKFAA MAARKRDREG EPKEPEEVES TSEKTKEEKL TSITVTDSKG RTVKVLDDDE
EELDCEFLNN RQAFLNLCQG NHYQFDHLRR AKHSSMMVLW HLHNRDAPKF VQQCATCSRE
LLTGYRFNCP TCGDFDQCQD CISNPKVPRH PHQLKPIPVA NAQQNELTEA QRKERQRSIQ
LHMTLLLHAA TCSSPKCPSA NCTKMKGLLK HGAQCQVKAT GGCNVCKRIW ALLQIHARQC
KAKSCPVPNC MAIRERVRQL KKQQQAMDDR RRQEMNRAYR GKR
|
|---|
| |