| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45728 |
|---|
| Symbol | |
|---|
| ID | 7200759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | + |
|---|
| Start bp | 48068 |
|---|
| End bp | 49121 |
|---|
| Gene Length | 1054 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179963 |
|---|
| Protein GI | 219118377 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.728584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAGGAGTCTT GAAACCCCCG CACGACCAGA GAAGTACTCA ACCAAATAGG CTATCACCAT
GACAACGCGT TGGCATTCTT CTCTTCGGTC ACTGATTCGG CCTCGTCGCG TCGGAATCCT
TCATCGACGG CTGTTCCACG CGACGAGTTC CCCACAAAGT GTGTTGCATA CCGAATGGAT
CGGACGCCCC AGTCTGGACA GCCAGCCGTT GACTGGTACC GTGCTCGTCT TTTTGCACGG
CTTATTGGGG AACAGTCGTA ACGTCAAGAC GTTGGCGCAA AAAACATGCG CGTTGTACAC
CTCACCGGGC CTTTTGGTGG ACCTCCGCGG ACACGGACGA TCGAAGGAAT GCCACGAGTA
TGGGAGTGGC ACAGAGACGG ATCGAGTTCC CGTAACCTTG GATGACTGCG TCGGAGATAT
CCAAGAAACA CTCCAACACG TTGGTGTGTC ACAATCTACC AATGGCAAAT TGACGAGCAC
CACCAACATT ACCTTCGTGG GACATTCCCT CGGCGGCCGT GTCGCCATGC AGTACGTGCA
CGCACGGTTG GAACCCCGGC CATCGCACGT GTGGCTGCTC GATACCGTTC CGGGCCTCAC
CAACACCAAG GTAGAATCCG TTCTCCGGAT AGCGCAATTG GTCCGGGAGG AGAAATCGGC
GTGGACTCGA CCCAACCTCC AGCGTGCACT GACCGAATCG CACGGTTTGG ATACCGCGAC
GGCTCAGTGG CTGGCGAGTT CTTACGATCC CTCGACGCAC GACTTTGGCT TTGACCTCAC
TGTGGCGCAC AATCTCGTAC AGAGTATGGA TGAACAGGAC TTTTTGGGGT TTCTCCAGGA
GGCCGTCCAC GAACACTGGT GTAAAATTGA TCTAGTCCGG GGTGGCCAAA ACGCGGACTG
GCACGCCTAT CCCCACACAA TTTCCTTGCT ACAGGCGATG GCGAAAGAGC ACGCCGGAAC
GTTTGGTTAC CACACTCTAC CCAAAGCCGG ACATTGGGTC CATATTGATG ATTTGCCCGG
TCTTTTGAAC GCCATGCGAT CCCGCCTTTT GTGA
|
|---|
| Protein sequence | MTTRWHSSLR SLIRPRRVGI LHRRLFHATS SPQSVLHTEW IGRPSLDSQP LTGTVLVFLH
GLLGNSRNVK TLAQKTCALY TSPGLLVDLR GHGRSKECHE YGSGTETDRV PVTLDDCVGD
IQETLQHVGV SQSTNGKLTS TTNITFVGHS LGGRVAMQYV HARLEPRPSH VWLLDTVPGL
TNTKVESVLR IAQLVREEKS AWTRPNLQRA LTESHGLDTA TAQWLASSYD PSTHDFGFDL
TVAHNLVQSM DEQDFLGFLQ EAVHEHWCKI DLVRGGQNAD WHAYPHTISL LQAMAKEHAG
TFGYHTLPKA GHWVHIDDLP GLLNAMRSRL L
|
|---|
| |