Gene PHATRDRAFT_45724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45724 
Symbol 
ID7200758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp36356 
End bp37495 
Gene Length1140 bp 
Protein Length378 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180160 
Protein GI219118787 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0445802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACATGCAAC GTTCGTTGAC TGCTTTTAGC CTCTACTTGG CGACATATTG GAGTCTTTGT 
TGCGCATTGA ATCAGCTCAA TTCTGTCGCT GTATTGACGA ACAAATCCAC GGGCAAGGAC
TCCGGACGAC CCATTCGCTC CCTTCGGGAC CGAAGTCCCC GTCGGCCTTC TGTCGCGGTG
CCAAGTTGTC ATCGAGACGC TTCTAAACGC AGTTCTAGAG GTGTTGCGAC TCGAAAATCG
TGGAATCCCT CCGCATTAGT GCGACTCCAG AATCCCAATG AAAATGCAAT AGCTTTTAAT
CTTGCATCGT CGGGGCTACG CCTTGTCCAA GATCGTGGTA CGAAAGTGTA TGCCAATACT
GCAGATCCCT CCATTGCGTA TAACTTGCAC GCTCCGACAC CAGAGACTCG CTTTCGATTT
GTTTCGCTCA ACGAATTGTT TCCGCACAGC AGTGCCATGC TGGGGTTTTC AGAGACATTC
AGTACAGACA AACACTTTCG CGAGCAACTG CGCAATTCAT TACGGCGCGA CTTGTTTGAT
GCTAATCCAA CCCACCATCG TCTTTCAGAA AAAGCAAGGG CGATTTTGTT GCAGCCGGAT
TCCTCCTTAC AAAGTTCCTG GTCGATATCG TCATCAGAAT CAATTCCAAC TCCTACACCA
CGGACAACAG CATTGCTGCA AAAGACCTTT GGTAGTACTC CTCATCCCAC AGAATACAGC
ATACCCACTG GAGTGGATTT ATTGAACGCA ATCGGTTCGT TGTGTGGTAG AGGCGCATCA
ACCCACTGGA TGGATATTGT AGGAATAAAC GATCGTGCTA TTTCTCATTC CTGGCACCAG
GATACGGGTC GAAGAGGCGA TGGTGAATCC TGGACCGTGC TATGGGGCTT TCCAAAAGAA
GATTGTTATG TTGGAACGGG TGTTTTTACG CACGTGTTGC CTTTAACCCA CGAACACCAT
GCACCGCACG GGCACACCCA GAACGAGCCT GTTCTTTTTC ACGGGATCAC CGTTCCTGAT
GAGTCCATCG TCCGGCCTTG TTTCGGGCCT GGCAAGGAGT TGCTGGTGTA TCGTGATATC
GATGTGTTGC ACTCGGCACC AGATGTAACG TACCGAACCA GTGTTATGCG CTTTATGTGA
 
Protein sequence
MQRSLTAFSL YLATYWSLCC ALNQLNSVAV LTNKSTGKDS GRPIRSLRDR SPRRPSVAVP 
SCHRDASKRS SRGVATRKSW NPSALVRLQN PNENAIAFNL ASSGLRLVQD RGTKVYANTA
DPSIAYNLHA PTPETRFRFV SLNELFPHSS AMLGFSETFS TDKHFREQLR NSLRRDLFDA
NPTHHRLSEK ARAILLQPDS SLQSSWSISS SESIPTPTPR TTALLQKTFG STPHPTEYSI
PTGVDLLNAI GSLCGRGAST HWMDIVGIND RAISHSWHQD TGRRGDGESW TVLWGFPKED
CYVGTGVFTH VLPLTHEHHA PHGHTQNEPV LFHGITVPDE SIVRPCFGPG KELLVYRDID
VLHSAPDVTY RTSVMRFM