Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45724 |
Symbol | |
ID | 7200758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 36356 |
End bp | 37495 |
Gene Length | 1140 bp |
Protein Length | 378 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180160 |
Protein GI | 219118787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0445802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AACATGCAAC GTTCGTTGAC TGCTTTTAGC CTCTACTTGG CGACATATTG GAGTCTTTGT TGCGCATTGA ATCAGCTCAA TTCTGTCGCT GTATTGACGA ACAAATCCAC GGGCAAGGAC TCCGGACGAC CCATTCGCTC CCTTCGGGAC CGAAGTCCCC GTCGGCCTTC TGTCGCGGTG CCAAGTTGTC ATCGAGACGC TTCTAAACGC AGTTCTAGAG GTGTTGCGAC TCGAAAATCG TGGAATCCCT CCGCATTAGT GCGACTCCAG AATCCCAATG AAAATGCAAT AGCTTTTAAT CTTGCATCGT CGGGGCTACG CCTTGTCCAA GATCGTGGTA CGAAAGTGTA TGCCAATACT GCAGATCCCT CCATTGCGTA TAACTTGCAC GCTCCGACAC CAGAGACTCG CTTTCGATTT GTTTCGCTCA ACGAATTGTT TCCGCACAGC AGTGCCATGC TGGGGTTTTC AGAGACATTC AGTACAGACA AACACTTTCG CGAGCAACTG CGCAATTCAT TACGGCGCGA CTTGTTTGAT GCTAATCCAA CCCACCATCG TCTTTCAGAA AAAGCAAGGG CGATTTTGTT GCAGCCGGAT TCCTCCTTAC AAAGTTCCTG GTCGATATCG TCATCAGAAT CAATTCCAAC TCCTACACCA CGGACAACAG CATTGCTGCA AAAGACCTTT GGTAGTACTC CTCATCCCAC AGAATACAGC ATACCCACTG GAGTGGATTT ATTGAACGCA ATCGGTTCGT TGTGTGGTAG AGGCGCATCA ACCCACTGGA TGGATATTGT AGGAATAAAC GATCGTGCTA TTTCTCATTC CTGGCACCAG GATACGGGTC GAAGAGGCGA TGGTGAATCC TGGACCGTGC TATGGGGCTT TCCAAAAGAA GATTGTTATG TTGGAACGGG TGTTTTTACG CACGTGTTGC CTTTAACCCA CGAACACCAT GCACCGCACG GGCACACCCA GAACGAGCCT GTTCTTTTTC ACGGGATCAC CGTTCCTGAT GAGTCCATCG TCCGGCCTTG TTTCGGGCCT GGCAAGGAGT TGCTGGTGTA TCGTGATATC GATGTGTTGC ACTCGGCACC AGATGTAACG TACCGAACCA GTGTTATGCG CTTTATGTGA
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Protein sequence | MQRSLTAFSL YLATYWSLCC ALNQLNSVAV LTNKSTGKDS GRPIRSLRDR SPRRPSVAVP SCHRDASKRS SRGVATRKSW NPSALVRLQN PNENAIAFNL ASSGLRLVQD RGTKVYANTA DPSIAYNLHA PTPETRFRFV SLNELFPHSS AMLGFSETFS TDKHFREQLR NSLRRDLFDA NPTHHRLSEK ARAILLQPDS SLQSSWSISS SESIPTPTPR TTALLQKTFG STPHPTEYSI PTGVDLLNAI GSLCGRGAST HWMDIVGIND RAISHSWHQD TGRRGDGESW TVLWGFPKED CYVGTGVFTH VLPLTHEHHA PHGHTQNEPV LFHGITVPDE SIVRPCFGPG KELLVYRDID VLHSAPDVTY RTSVMRFM
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