Gene PHATRDRAFT_35863 details

Gene Information

• Locus tag: PHATRDRAFT_35863
• ID: 7201062
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 923256
• End bp: 925227
• Gene Length: 1972 bp
• Protein Length: 603 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002180347
• Protein GI: 219119161

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.186525
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTTAT CCAACAAATC TTTCCACGAT ATTTTTCTGC AAGTCATGGT AGGGCACCCT 
GACGACGATA TACATAGGGA CGCCCACATG CAGGATACAC GGCGTTCCTC CCACCCCAAC 
GATACCTCAC CGCTCCCATC CGACGTCGTG ATCGGATGGC GTTCGCTGTG TGGTTCCGTC 
CTGCCGGAGA ATATCCGTGC CCACGCGGAA GCCTATTCTG CAACGGCCGT ATCACCACAC 
CATTCCAATA CTCGTCGAAC GACCCAGGCT ACCGCCAATT CTGTGACTAT TAGCAACCGC 
ACATTCCCGC TCGATTCGAA ACAATTGTCT GATCCTAGTA ACGTGCCTGC CTCCAACCAC 
AACGAAAACA GCTATCTATA CGAGCGTCAT AGTCCTGTGC CACTTGTGAG CCCATTTCTA 
CCCGATATGA CGGACTGGGA CAATTCTATG CAGCTTGGTT TACAACCAAT ATTTACGGAT 
CACGATTCAA CATTTGCCTC TGCTTTCGGC AAAACGTACG TATCTCCCGA AACCTTGCCG 
GTTCCTGCTC TCCCGGCGCC TCCCCCCGCT TTCGATCGGG CGCACTCCTT GGCCTTTTCG 
GTTTCCAGCG ACTGTACGAG CCAATCTGCT CTCTTTTTTC ATCCTATATC TAATCCCACA 
CACGATCCAC CCGTTTCACC ACTCAAACCA TGTTTCTTGG ATACACCAGA GCAGCCCGTG 
GTGCCAGACA TCGTCCACAA CTTGCCAATC GAACCCCGTC CCACCAAGAA GCTACGCACA 
ACGGAAACGA TCAATAATGA TGATCTGTGG CCTCGCGCGT TGTGGCCACA ACCTACACCG 
CAGCTAGCGA TCAACACAAC GTGTGCGCCA CTCGCCCCAC CACCGGCCCA GCACGACTCC 
CAACCAGTCG TATTGCTCCC CATGCCAATT GTTTGGCCCA AAACACCAAC AGCCTTGAAC 
ACAAACCTGA CTTTCGACAC GTCGTGGCTC TCCGCCGCTC AAGTGGCCAC CAAGAAAAGT 
GACCCCGTCG TGAAAAGGAA TAAGGACAGC GAACAGATTT CCGCCAGCAC ACTTGTCGCC 
TCGCGACCTA GCGTGGTCGA TCCACGATTG GCTACGTTCT TGGAACGCTT TGACAACGCC 
GAATGGCGAT TGCAAGCCCT GCAGGCCGAA AATGCCGAAC TCCAAGCCAA AGTGCAGGAA 
GCCGAACGGC AAAAACGCGC CATGCAACAG TTGGCCAGGT AATGCAAGTG CCTCGATAGA 
AATTCTCATA GATAGAATCG GCGCGGTGAT CTATAGTGTC GTAGCTATGC ACACGGGGCC 
CGTAGTAACA AAGGTCAGAG TTGAACGGTC TCGCTCGGTA GCTCAACATT GCATCGTTTG 
GACTACTCCG ACAATCAGAC GCCATTTGTT CCAAAGTGTT GTGAATGTGG CAGGAGTAGC 
GATCGTAGGG AAGCGTCCCA AAAATATGGC GTGGGTGACT TTGCGAGCTC GTCGACATGC 
TGGGACGATG TTGCACCACC ACTGCAACAG TAGCCGATTC CTCTGTACCG ATCGTGTTGT 
AATAGAGGAA AGGACAATGA CTCTGAATCC AAGGAATCGT CCGAACCGTC ACACGTTCCT 
TTGCGAATAC ATATCTGATG TGGATGCGTG CGGTCGTCGT CGCTGGAACC GGACAAATTC 
ACGGTCCATA CGGGCCGTCG CGAAGTCCAG ACGCACTGTG TGTGCGACTG CTGTCGTTGC 
TCCTCTCCTT CGGATACGTG AGCGGGATCT CGCACATTCT CTCCTTTCGA AAGGATTCCT 
ATCCCGGGCA GTCTCCAGGC GCATACCCCA CGAGCTAGAC ACAATTCGTC CAGCGATGGT 
AATGTTGGCA AGCCTTCCGC ACGGCATGGG TACAACATGG AGTCAAGGAA AGGTTGTTGA 
AGTTGTTCTA AAACACCGAT CCTGTGTTTG CGTCGAGAGT TGGAGAGCTT GA 

 

Protein sequence

MDLSNKSFHD IFLQVMVGHP DDDIHRDAHM QDTRRSSHPN DTSPLPSDVV IGWRSLCGSV 
LPENIRAHAE AYSATAVSPH HSNTRRTTQA TANSVTISNR TFPLDSKQLS DPSNVPASNH 
NENSYLYERH SPVPLVSPFL PDMTDWDNSM QLGLQPIFTD HDSTFASAFG KTYVSPETLP 
VPALPAPPPA FDRAHSLAFS VSSDCTSQSA LFFHPISNPT HDPPVSPLKP CFLDTPEQPV 
VPDIVHNLPI EPRPTKKLRT TETINNDDLW PRALWPQPTP QLAINTTCAP LAPPPAQHDS 
QPVVLLPMPI VWPKTPTALN TNLTFDTSWL SAAQVATKKS DPVVKRNKDS EQISASTLVA 
SRPSVVDPRL ATFLERFDNA EWRLQALQAE NAELQAKVQE AERQKRAMQQ LARRHLFQSV 
VNVAGVAIVG KRPKNMAWVT LRARRHAGTM LHHHCNSSRF LCTDRVVIEE RTMTLNPRNR 
PNRHTFLCEY ISDVDACGRR RWNRTNSRSI RAVAKSRRTV CATAVVAPLL RIRERDLAHS 
LLSKGFLSRA VSRRIPHELD TIRPAMVMLA SLPHGMGTTW SQGKVVEVVL KHRSCVCVES 
WRA