Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35854 |
Symbol | |
ID | 7200857 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 907537 |
End bp | 908403 |
Gene Length | 867 bp |
Protein Length | 234 aa |
Translation table | |
GC content | 43% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180139 |
Protein GI | 219118744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0331232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTG AGGCAGGCAA TACTGACTCC ATCACTAAAG AGTTACACGC TTTGAACCAA TGTGGGCCAA GCAGAAATAT TGCCAAAAAG AGAGTTATCT ACACAAAGGA ACCATTTGAC CAAAATCTAA AATCTTTTGT GAAGCTATAT GCCAAAAATC ACAGCAACAT GGGCGAAAAG AATGGCTACG TGAATATCCC TGTTTTGGTA AGCAACAAAA TGAGCGGTAA AGACCATATT GTGGATAAGT ACTACAAAGA CATTCGCAGA ATTTACCACT TTGAAAAAAG CTGCTGTGTT GATGTCCCCG ACCCAGATGA ATCCGTTTTT GTAAGTTCCT GCTGTTGCTA GTAGGGCCGG TGATATTTAT ATGTATATCA GGCACCATTG TTACTGATTG CTCTTATGTT TTGTTTCTAT AGCACTTTCG CAATTTTGTC AGTGAGAACG AAGAACTACA ATTTCGTGCA GGTCACGAAG AGCTCGTTCC TGAGCAAGTG GCAAATGAGT TGTTTGCCCA TCTCAATCCT GGCGACAAAG TAGCCATAAC CTCACGCTAT CCCAATCATT TTCGAACAAG CATGATTGTG GATGCTTTCA AGAAGCGAGA GATTCAGGTT CGAGTCATAG AGCCACGTTC CGGGGTGGCG GACTTTTGCT TCTTGATGCA TGCCCAAAAA GAACTAGTTG GTACGGCCAG ATCTTCGTTT TTGATGTGGG CTGGTCTCCT TGGAAACGCC ACAAGGGTAA GACCATACAC GGTAATGATG CCTGACGGGA ATAGCAGGGT CCATCACTAC AACTACACAA ATCCAGAGCT CAAATCCCGC TTTCTTTTTG AGCGCTACAA TGCAAACTCA AGTATAG
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Protein sequence | MRFEAGNTDS ITKELHALNQ CGPSRNIAKK RVIYTKEPFD QNLKSFVKLY AKNHSNMGEK NGYVNIPVLV SNKMSGKDHI VDKYYKDIRR IYHFEKSCCV DVPDPDESVF HFRNFVSENE ELQFRAGHEE LVPEQVANEL FAHLNPGDKV AITSRYPNHF RTSMIVDAFK KREIQVRVIE PRSGVADFCF LMHAQKELVG TARSSFLMWA GLLGNATRSS NPAFFLSATM QTQV
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