| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35746 |
|---|
| Symbol | |
|---|
| ID | 7201131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 660904 |
|---|
| End bp | 661629 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180289 |
|---|
| Protein GI | 219119045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00456288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCT CTGCATTGTC TATGTTGCTT GTTTCTCCTG ATCTCTATCA ACGTTCCGCA
TTGCCATTCC CAGCAGTTCA GCCATTCGTC TCCGCCAACA TTATGACCAC ACCGTCCTCC
GGTGCGGCGA GTAGCAATAG CTGTTGCAGC AGTACCTCCC TCGGTGTAAC GGCAGGACCG
GCTTTTGACA CGGCAGCGCT CGCTTTTTTC GGTGGTCTTC GGATACCAGC AAGTCTACTA
GCGGGATCTT CGTTGGCTTC GCTCTTTGCG ATGGTTCAAC AAGCTAAGGC GACCAAGACT
TTGTCTCGCA CCGAACGTGT AGCTTTGTGG GTGTACCACT CTTCGGCACT CGGTACTTTA
TGCTTGAGTT TACTTACTGT CATTACCACT ACCGTTGGAT CTACGCTGTT ACTATTGGGA
CGCTTTGATG TATCCCAATA CGGCGATGTA TATCACTTTC TGCGGGGCAA CTTTCTAATG
GAATTTGTTG TTTCCCGTTG GTCGTTTTTG TGCAGCGTTC AGCTGTTTTT ATTAGCCATC
ATGAATCGAG TATTGCTAGA ATTTGATCTT TTGAAGCCGG GTCGGCGCAC TATTGGTTTG
CTGGTAGCAG CCGCTATGAT GGGCTTGATT GCGCACTGTT TGTCCTACAT AAACACAACC
TTGAATTGTT GGCCAAATCT GTTGTACATG ACCAAGCAAG TAGTGGAGGT AAGCACAGAG
TCGTAA
|
|---|
| Protein sequence | MTVSALSMLL VSPDLYQRSA LPFPAVQPFV SANIMTTPSS GAASSNSCCS STSLGVTAGP
AFDTAALAFF GGLRIPASLL AGSSLASLFA MVQQAKATKT LSRTERVALW VYHSSALGTL
CLSLLTVITT TVGSTLLLLG RFDVSQYGDV YHFLRGNFLM EFVVSRWSFL CSVQLFLLAI
MNRVLLEFDL LKPGRRTIGL LVAAAMMGLI AHCLSYINTT LNCWPNLLYM TKQVVEVSTE
S
|
|---|
| |