Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35692 |
Symbol | |
ID | 7200973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 545104 |
End bp | 546084 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180068 |
Protein GI | 219118598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.933776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCTA CCAAAAACGC ATATCACGAT CCTACATTGC CGACAACTAG TATCAGTAGA GTGGTACCGT ACAAGCGCAA GGTTCCAGGA CGTTCCGCAC GGAGACGCCG GAAAAAGCTC TTGGATATAC AGAGAGCCGT AAGCGCAATT AATGATTCAC AAACAGGTTC ACACTGTCCG ATAGACAAGC CCTCGGTCAT ACCGCAAGAT CGGTCTAGAG TGTGGCCGGC GGTGGTCGAA AAAAGGAACG AGTTTGGATG GAACAACGAC GACGAAAATC TTCTAATCGC GCAACTGGGC TACCTTCCCG GCAACGCGAT CCGTGTCACT TGTCGCAGAA CTCATTCGGA AGAACTTACC GGATCTCCGC ACGAAGAAAG CAGTACCGGA AATGACGATC CCGTGGTTGT TCAGCTGTAT CCAATCGTCC TCCGGGAGGA GTATTCTGGA GGAAAGTCGG ACGGCCGAAA ATTCAAAGGC AGAAAGCGGC AAAAACTACA ACCACTGGAT GATGACCAAC AGGGGACCAG CGGAACGCCA ATGGACGGAA TTGTCCTGGA GCCGTTCCCT ACCATGTACT GGTTAGTGAA TCCACTGTTG CGAGCGCAAA TATCCAAGCT GGAAGTGGAA GGCTATGGAG CAAATTTTCA GCAACGTCTC GCGGAGAATT CGGACGAATT GGCAAGAATG AAACGAGCCC ACGATGCCTA CGGTAAAGAG AGGTTGGATC TGCTGACGGC TCCGGATCGG CAACTTATTC AATCTCGTCG ATGGGAGAGC GCGTTCGCGA TTGACCGCGG GGTTGCCGGA ATACGCAATT TTGGCAGCGT CAAGTGTCTG CACGCACACA CCGCGCATTA CCTCAGTGGT AATAGCGACA ACTTGATTGG TCAGTGGGTC ATGGAAGCCA TTGCTTCTAA AGCTGAAGTG GGCACAAACG GCGTGGCAGC TTTGAAAGCG AATGAAGAAT CGGAATCATA G
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Protein sequence | MSSTKNAYHD PTLPTTSISR VVPYKRKVPG RSARRRRKKL LDIQRAVSAI NDSQTGSHCP IDKPSVIPQD RSRVWPAVVE KRNEFGWNND DENLLIAQLG YLPGNAIRVT CRRTHSEELT GSPHEESSTG NDDPVVVQLY PIVLREEYSG GKSDGRKFKG RKRQKLQPLD DDQQGTSGTP MDGIVLEPFP TMYWLVNPLL RAQISKLEVE GYGANFQQRL AENSDELARM KRAHDAYGKE RLDLLTAPDR QLIQSRRWES AFAIDRGVAG IRNFGSVKCL HAHTAHYLSG NSDNLIGQWV MEAIASKAEV GTNGVAALKA NEESES
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