Gene PHATRDRAFT_35668 details

Gene Information

• Locus tag: PHATRDRAFT_35668
• ID: 7201098
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 481169
• End bp: 483249
• Gene Length: 2081 bp
• Protein Length: 682 aa
• GC content: 50%
• Product: beta-xylosidase
• Protein accession: XP_002180246
• Protein GI: 219118959

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.12421
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTCTT GCTTCAGGAT ATTGACTATA TGCACGTCGT ATTTCTTCTT ACTGCTTGCG 
CTCTGGGCAT CGTACTCCAT TTTTGAAGGC TCTGTTCGGC TTCAAGGTCC AATCGGGCTC 
GACCGCAACG TCAGCCCCGT CAACAACTAT ATTTGGAAAG ACAAAGTCCC GAATTTTTGG 
GGATGCCAGA ATGACGTAGC CAAAGCACTG CCTTATTGCG ACATGTCGCT CTCAATTGAC 
GAGAGACTGG AGGATTTGCT CTCACACTTG ACCCTGGATG AGAAAGTTGA CATGATCGGC 
GCCGACCCTA CGCAAGACGT TTGTATGACT CATACTATGA ATGTGTCTCG CATAGGCTTA 
CCAGACTACT ACTGGCTCGT GGAAACAAAT ACGGCCGTTG GATCGGCATG TATTGCCGAA 
AACAAATGTG CGACTGAGTT TTCGGGCCCG TTATCGATCG CCGCTTCTTT CAATCGATCA 
TCCTGGTTTC TCAAAGGTAG CGTTTTTGGC ACCGAGCAAA GGGCGCTGAT GAATGTCCAT 
GGCGAACGAT TTCATACCCA TAGCGGCCGA CATATTGGTC TGACAGCGTT CGGCCCAAAT 
ATCAATCAAC AACGCGATCC GAGGTTCGGG CGCTCATCGG AGTTGCCGGG GGAAGACCCG 
TTTCTGTCGG GGCAGTACGC CGCGCACATG GTACAGGGTA TGCAAGAGCG AGATGCCAAC 
GGATATCCTA AAGTTTTGGC GTATCTGAAG CATTTTACGG CGTACAGCCG AGAGGAAGGG 
CGCGGGAACG ACGACTACAA TATTTCGATG TACGATCTGT TTGATACATA TTTGCCCCAG 
TACGAAATGG GCATGGTCCA AGGCGGAGCC ACCGGAGTTA TGTGCTCGTA CAATGCTGTC 
AATGGTATTC CCGCGTGTGC CAATGACTAT TTACTCAATA AAATTTTGCG GCAACGCTGG 
AATCGTTCCG ATGCGCACGT GACGACCGAC TGTGGGGCGG TGAACAATCT GCGTGGCAAA 
CCAATCCAGG CGGCCGATGA AGCGCAAGCT GCCGCAATGG CACTCATGAA TGGCGCGGAT 
ATTGAGATGG GATCAACCTT ATTTGTACAC AATCTCACTA CTGCTATAAC ACTGGGATAT 
GCGACCGAAG AAGCAGTCAA TCAAGCTATT CGTCGTTCAT ATCGTCCTCA TTTTATTGCG 
GGTCGCTTCG ATGATCCTAC CTTGAGCGAA TGGTTCAGTC TAGGGCTAGA CGACATTCAG 
TCAAAAAAGC ACCAGGAGAT CCAATTGGAA GCAGCACTTC AAGGACTAGT TTTGCTGAAA 
CATGAGGACA GCATTTTGCC TATTGCTGCG GGCACTAAAT TGGCGGTTCT AGGTCCATTA 
GGAATGACGC GGTCCGGCCT GATGAGCGAC TACGAAAGCG ACCAAAGCTG TTTTGGTGGC 
GGGCATGATT GCATACCAAC GTTGGCCGAG TCAATCGGAT TCATAAATGG AAAGGAGTTC 
ACCGTTGCAG CTGCTGGTGT CGATGTGGAC TCTCGCAATA CATCGGATGT TGAGAGAATC 
TTGCAGCTTG CCGCTGACAG GGATCTTATA GTGCTTTGTC TCGGGAACAC AAAAACTCAG 
GAGCAAGAAG GATTTGATCG CAAGGACACA GCTTTGCCGG GTCAACAATA CGCCTTGTTT 
GAGGCCGTAC TTACTCTTCG CAAACCTGTA GTTCTTGTTT TGGTAAATGG TGGCCAGATC 
GCGCTTGACG GAATGACCGG ATACCCTTCG GCTATCATTG AAGCCTTCAA TCCCAACGGT 
ATTGGCGGGA CTGCCTTAGC TGCGTCTCTA TTTGGTCAAG AGAATCGCTG GGGGAAACTT 
CCGTACACAA TATATCCGTA CAGTGTGATG CAGTCGTTCG ACATGAAAGA CCATAGCATG 
TCAGCCCCGC CGGGCAGGAC GTATCGATAT TTCACGGGAA AAGCAACGTA TCCATTCGGA 
TACGGTCTTT CACTCACAGC ATTCGAGACA TCATGCTTTC ATCAAAGGAT CAGCGATTCC 
TCGATTCTAC TGGAATGTAC TGTCTGGAAC ACTGGAAATA G 

 

Protein sequence

MPSCFRILTI CTSYFFLLLA LWASYSIFEG SVRLQGPIGL DRNVSPVNNY IWKDKVPNFW 
GCQNDVAKAL PYCDMSLSID ERLEDLLSHL TLDEKVDMIG ADPTQDVCMT HTMNVSRIGL 
PDYYWLVETN TAVGSACIAE NKCATEFSGP LSIAASFNRS SWFLKGSVFG TEQRALMNVH 
GERFHTHSGR HIGLTAFGPN INQQRDPRFG RSSELPGEDP FLSGQYAAHM VQGMQERDAN 
GYPKVLAYLK HFTAYSREEG RGNDDYNISM YDLFDTYLPQ YEMGMVQGGA TGVMCSYNAV 
NGIPACANDY LLNKILRQRW NRSDAHVTTD CGAVNNLRGK PIQAADEAQA AAMALMNGAD 
IEMGSTLFVH NLTTAITLGY ATEEAVNQAI RRSYRPHFIA GRFDDPTLSE WFSLGLDDIQ 
SKKHQEIQLE AALQGLVLLK HEDSILPIAA GTKLAVLGPL GMTRSGLMSD YESDQSCFGG 
GHDCIPTLAE SIGFINGKEF TVAAAGVDVD SRNTSDVERI LQLAADRDLI VLCLGNTKTQ 
EQEGFDRKDT ALPGQQYALF EAVLTLRKPV VLVLVNGGQI ALDGMTGYPS AIIEAFNPNG 
IGGTALAASL FGQENRWGKL PYTIYPYSVM QSFDMKDHSM SAPPGRTYRY FTGKATIRDI 
MLSSKDQRFL DSTGMYCLEH WK