Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35564 |
Symbol | |
ID | 7200792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 236534 |
End bp | 237391 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180200 |
Protein GI | 219118867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.189568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGA GTCACTTTGA CCTCCCACTT TCACGACGGG AAGCAATTTC ATCATCATCA GCTTTCTTAC CCGGAATCCT CTCGAACCCT GGTCAAGTCC AGGCCAGAGA GGTATCAGTA TCACGTGGAA CTCTCAGAGA TGTTGTTGAT GATGCAACGT ATGCTGCTTT GGTGTACGAA CCCAAAAGAA AAGAGCAGAC ACCACTTCCG CTGCTTGTGG TACTCCACGA GGCCGGCAGG AATGACGAAA CAGTCTGGAG TTTGGCAGAT CCATTGGGTG AACATGCTGG CTTAGCGCCC AGCCTTTTGT TCACCGGTCG TGCTCCGACA GCCTTGGCTG ACAAATTTGC CATGGTCGCG CCGTACTCCG CAGGGAAACG TTCCTTTTAC GAAGAGCCTC GGAGCAAAAT ATTACAATTT ATCGAATGGG TCTGCAGCGA AGCTGGGCAA CGAGCAGGTT GTCCCTATGT CGATCCGAAC TCCGTGTATC TTTTTGGTTT CAGCGATGGA GCGACTCTCG CTGTTGAGCT TGCAACCACC AGGAGATTTC GAGCTTGTAC TATTGCTGCG TACGGATTTT CTGGAACGCT TCCGAAATTG GCGTTGGACC GTTTGAAAGG GATCCCTTTC TGGGTCTTTC ATTCCGCGGA TGATGTCATT TTTCCTGTGG TATACAGTGA TCGTTTGGTA ACTTCTCTTC GGACCGCGAA TACTGAAAAT ACAGAAATCA TTCGATACAC ACGATACGAC AAGGATCAAG AAGGATTTGA GGGGTCGGTA CGAGGTCACT CAACAGGAAT TACTGCAACG AAATTGCCAG ACGTCTACGA GTTCTTGCTT ACCTCAAATA GAGCCTAG
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Protein sequence | MAASHFDLPL SRREAISSSS AFLPGILSNP GQVQAREVSV SRGTLRDVVD DATYAALVYE PKRKEQTPLP LLVVLHEAGR NDETVWSLAD PLGEHAGLAP SLLFTGRAPT ALADKFAMVA PYSAGKRSFY EEPRSKILQF IEWVCSEAGQ RAGCPYVDPN SVYLFGFSDG ATLAVELATT RRFRACTIAA YGFSGTLPKL ALDRLKGIPF WVFHSADDVI FPVVYSDRLV TSLRTANTEN TEIIRYTRYD KDQEGFEGSV RGHSTGITAT KLPDVYEFLL TSNRA
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