Gene PHATRDRAFT_35562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35562 
Symbol 
ID7200914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp234165 
End bp234971 
Gene Length807 bp 
Protein Length268 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180199 
Protein GI219118865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGCGA CCTCGCAAAC AGGCACAGGG TTGTTGACCA ACATTTTGCG TCACACGATT 
TTCGGCATTG TGACCGTATA TTTAGTGTTT GCCGTGTACG AAAAGACCAG CACCCGGAGC
AGCGTCGTGG AAGCCACCGC ATTCGTATCG CACACGCGCC CTGCATCAGT CGCCATGAAC
ACTACCAATC CACGCCTGCA TCGTGTGCTT TGTTTCGGAG ATTCTCTCAC AGCCGGAACG
TCTGGTCGGC AATTCTTTCC GTACGCCACG TACTTGGAAA GTAAGCTGCG ATCGATGGGA
CGTAGGGTTC AAGTGCAGCA CTTGGGTATG CCGGGTTGGA CTGCACCGCA AATGCTGGAA
CATCTCGATA GCAATCGGAC GGGATTGCGA CGGGCAATTC GGGCCGCCCA AAATCCGGGT
TTCTCTTTGG TTCTGCTATT GGCCGGTACC AATGATATGG GGAGAGGATA CGGTCAAGCA
GAAACAGTGG AGAATATTTT GCAGCTTCAT CAAGTAAACT ACGACTCGGG GGTCCCGAGA
ACCGTTGCGA TTGCGATTCC ACCGTCGGGG TACCAGTCTG TAAACGAGCT GGCCAGGGCA
TTGGCGGGTC GGATCAACCA GGATTTGCGT GCTTTTTGCG ACACCGAAGA TCGAGCAACG
TTTGTGCCGT TTCCGTTTGA TTTTGAACGT GGAGGTGCGA ATTGGTTTCA AGATACTCTG
CACCTTTCGG AAACAGGGAA CAAAGGTTTG GGCGAAAGCC TAGCTCCCAT TGTAGAAAAA
ATACTACAAG AAATAGACTC GGCATAA
 
Protein sequence
MVATSQTGTG LLTNILRHTI FGIVTVYLVF AVYEKTSTRS SVVEATAFVS HTRPASVAMN 
TTNPRLHRVL CFGDSLTAGT SGRQFFPYAT YLESKLRSMG RRVQVQHLGM PGWTAPQMLE
HLDSNRTGLR RAIRAAQNPG FSLVLLLAGT NDMGRGYGQA ETVENILQLH QVNYDSGVPR
TVAIAIPPSG YQSVNELARA LAGRINQDLR AFCDTEDRAT FVPFPFDFER GGANWFQDTL
HLSETGNKGL GESLAPIVEK ILQEIDSA