| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35557 |
|---|
| Symbol | |
|---|
| ID | 7200789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 222089 |
|---|
| End bp | 222565 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180194 |
|---|
| Protein GI | 219118855 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.356085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTT GTAGCAAAGC TTGGGCCTTT CGCGTTACGT GGCCAGTATT GCCACCATCA
GCGCGTAAGC GACCTGCCTT GGGCTTCCGG GTACAACAAC GCTTGTTCCG GTCAACTAAA
AGCCTACCCG CAAGCGTTTC TGGGTCTATC TACACGTGCG ATGATAGCAA CGCACCACGT
GTTCGATTAT TTACGAAAGA GGGATGTACG CTTTGCGACA AGGTAAAAGG CGTCCTTGTC
GAACTCAAAG CGCCATACCC TCATTGTCTT GAGCAAGTTG ACATAACGGA CAAAGAAAAT
GCAGAATGGT TCGATCGCTA CAAATATGAT ATTCCTGTTC TGCATCTGGA TGGGAAATAC
TGGACGAAAC ATCGTCTGAC CACGGAGGAA GCTATTCGAG GTCTGAAAGC TTTTGGAAAT
GGGGCGTTCG AGAGCCAGGC AGGCGAGCCT AATGCTGCCA GAATGGAAAG GAAGTAA
|
|---|
| Protein sequence | MTLCSKAWAF RVTWPVLPPS ARKRPALGFR VQQRLFRSTK SLPASVSGSI YTCDDSNAPR
VRLFTKEGCT LCDKVKGVLV ELKAPYPHCL EQVDITDKEN AEWFDRYKYD IPVLHLDGKY
WTKHRLTTEE AIRGLKAFGN GAFESQAGEP NAARMERK
|
|---|
| |