Gene PHATRDRAFT_35556 details

Gene Information

• Locus tag: PHATRDRAFT_35556
• ID: 7200910
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 215786
• End bp: 221848
• Gene Length: 6063 bp
• Protein Length: 1902 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002179992
• Protein GI: 219118439

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCGC CGTCGGATGA GACAATAGCG GGACCGCCAT CGTCTCCGAC AACCGAAGAT 
GCCGGAACGC AGGCTCGGAA AGCCTCGGCC GCCCTGACGT CGAAAGTAAT GCTGGAAGAG 
TTAGAACGTC AGTACATGCA GATTAAAGGT GAACGCGATG ATTTGCAGCA AGAGTTAACC 
GCGGCGGAGG AAAAGTTCAA GACGCTCAAC GAGTCGTTGA CTTCCAACCA AGCACTCGAG 
GTGGAGAATG CCGCGCGGCA ACACGAATTG CGTGTGGCGC AAGAACGCGT AAAAGCATTG 
GAAGAAGAAC AAACAGCTAC GAAAGAGCGC ACCGATCGGG CTCAAGCCGA ATCGGATCGT 
CTCCGAGAAG AAATCGCGTA AGTACAACGA AAGCACTCTC GCGTTTGGAT AAAAATGGCA 
GGGATCGGAT ACGTACCGTA GGCCGCGAAA CGATCACTCA CGATCAACCC GAAAACTCTT 
TCTCGACAGT CGTTTGGCCG GATCGAACAG GGAACTTTCC GAGAATATTG CAACGTTTGA 
AGTCCAGAGC AAGCTCAGTG AGTCCCAGGC AATTCCCCTA TTTCACGAAA AGCAGCGTCT 
CCAGACGGAA CTTGACAGCT TGCAAGCCCA CGCCAATTGG CTGGAACAAG AGCTAACGGC 
CAAGTCACAG GATTACCAAA AGCTGCAGCG AGAGTCACGT GATCGTTCTA TTCAACTTCA 
GCTTCAACTG GACCAAACAA TTAACGAAAA AGAAGCTTTC GAAGCCCGTT TGGATGAATT 
GCACAAAATG GAGCGGCGTT TGCAGGACAA AGTCGAGGAG CTTTCCCACG ACTTGTTGAC 
GGGGAAGCAA GCCATGACGG ATCTACAGGA ATCTACAGAG ATCGAAATTC GAGAGGAACG 
GCGTCTTGTA CAGCTCCAAA AGACTCATTT GGATCGCTGG GAACATCGAT ACAATGACGT 
CGTCCGTGAA AACGAGAGCC TCAAAAAGGC TGCCACGGAA GCCATGGAGA CATCGCGTTC 
AGAACTTCTC CAGACCAGCG AAGCACTGGA AAACAAGTAC AAAGATTTGC TGAGAGAGCA 
AGCGGCCGAG TACGAAGAAA AGCTTAAGTC GAACCGTTTG GAAGCCGGTC CAGTTCGCCT 
GGCTCTGCCT GCACCCCCGG CTGCTGTGGC GACCGACTAC GAAGATGATG TTCCACTCAA 
TCTTACCGAC TTATACACAC GTTTAGAAGA GACCAAGGCT ACCCTGCGTC GCGAAACAGC 
TCGGGCCGAT CGTGCCGAGC TCTTGAATGA GCGCATTCAG AAGGACATTG CTGCTAAGGC 
ACCTTTGTTG AACCGGCAAC GGGAAGAATA CGACTTTGCC CTGGACCAAA TTCAGAATTA 
TCAGCGCCGC TTGGAACAAG CTTTAAATGA AGTTGATAAT GCACGCGAAG ATAGTAAAGA 
GACGCGCCGG GACGCAAATC GGCTACAGAA ACTGTTGTCG GAGAGGACTT CCGAGTCCAA 
GGAGTTGGCA AAACAAGTTC AGGCACTATT GGTAACTCGG GCAGGCGGGC AGGTGGGAGA 
AGAAATTCCG ACTTCGATTG TCGAGATTCA GAATCAAAAC CAGCGATTAC TCGCGGAGCA 
CCGTCGACTA ACTGAAACAG TCAGAGAGCT GGAAAGCAAG CTTGAGTCGG ATACTCTGAA 
GGCAAAACTG GATGCAGTGG AAGCGGAGCT AGCGGATTTG CGCGAAGACC GTCAACGTCA 
AGAGACTGCC GTGGAGCGTA TAGTTCAACA GAGAGATTTG TATCGAGCTA TTTTGAGCAA 
ACAGGATGCA AACGTGCTTG GCTCAGAGTC CGAGCAGCTT TCGGCGATGG AGATTGCCAA 
ACAGCAGTCG GAGCGATACA AGGCTTTGGA TCAGAAAAGC AAGACCTTGG CATCTGATCT 
GGCTGCTGCC AGGGGTGAAA TCGATCGCAT GGGCCGCGAG AGAGAATCTA TGGTTGAGCG 
GTTGGCCCGT TACGAAGCCC ATTCCGCCGA AATGAAAGCC GCAGTTGACA CATTGGAACG 
CGAGCTGTTG AGTGCGCGTG GTGACGCAGC ACGAAGCAAT TCCGAGTCAC TCTATCACAG 
AGAGAGAGCT GAGCGTGTGG AGGAGTCGCT GCAGCGTGCG CGCGATGAAA TCTCGATGAT 
TGGAAGTTCG AAAGCTGAAC TTCAACGCAT CAACACTGAT CTACAGCAGA GAGTTGATAT 
TGTTCGCTCT GAAAGTTCTC GAGTTGCCAC GGAAGTACGA CAGGCTGAGA TGAAGGCTCG 
GTTAGCGGAG ACACAAGTAG AGACGGCAAA AGCAAGTGAA TCGCGAATGG CGGAAGAGGT 
CAACCAGCTA CGTGGGGAAG TTTCAAGGCA AGGATCCATA ATAGAGTCAA TCAGAAGAAT 
CGAAGCTTCT CTTTCTGCAA AGAGTGGTAG CGAACGAGAG GTTCTCAAGT CTGAATTGGA 
GAAACTTTCT CAGGTCCACA AGTCGGAGCA AACAAGCTTT AATACGAAGA TCGAAAATCT 
CAACGCACGA ATTCAAGAGA TGGACTCGCG TGTTGTTGCA GCTAATGATT CAAAGGACAA 
GTTTCAATCA GAGTTATCTA GCGTAAAGGA TGAGCTGAAT GCTGTCACAG CGGAGAGGCA 
AGAGCTCAAT TTGAAGGCAC GCCGTCTGGA AGCTCAACTT CGTGCCGCAA AGAAGAAGCT 
TGGGGAAGGA GATGACCTAG ACGACGTTGA GGTAGCTCTA CAAGCCCGCA TTGAACATCT 
CACCAACCAA CTGGAGGAGA CAAAGAGTGA ACTCGCCAAT TCAAAGAAAC AGGCTGACAC 
ATACCAGCTA ATATCGAAGA ATGCGGAGTC GGCTCTCGCC GAATTGAGTC AAGCTACGGA 
GACTATGAAG GCTACGAACG AGTCAGAAGT GTTGGAACTC AACGGAAGAC TAGAAAAACT 
CCAAAAGGAA AACGCATCAA AACAAGAGAT TGTTCTCGAT TTGACCAAGG ATTTGTTGAG 
TCAGAGGGGG GAACAAGAGA AGGTCGAATC TATATTGAAA TCTGAAATTG AGAGTCTGAA 
AAGTGAGATG AAGACAAGGG AACAGGATTC TGAGTCTTCA GCAGCTGGGA CGGCCGCTTT 
GAAACTCGAC TTAGATGCTA TGCGCACCGA GGTTGCCACG GCCCAAGGCA ACTACGAGCG 
AGAGCTCCAA CTGCATTCGC AGGCACGCAC TGCTTTGCGT GAAGCACGAG AGCAGGCTCA 
GGAGGAGACA CGACTACGAC ATATTGCTGA GGAAAAAACG GACGCTTCTG CGAGGGAGTT 
CGATCAGCAG AAGAACGTTT GGGAACAGGA AAAGTTATCT GCGAATGAAA ATGCAAAGAT 
GATAGAAGAA AGTCTAAAGG AAGCCCGTGA GCAAAATAGA GTCCTTCACA TGCAACTAGA 
GAGTTTGGGT GCAATGGTAG AAGAGAGTCA AATGTCACGT GCTGTGGCTG CCAGCGAGAT 
CCCAGAGCCC GGAAACTCAT CGGAGCAAAT GAATTTGCAG AAAATGTTGT CAGAGCTGCG 
AGAAATTCTC AAGTTTGTAA GGTCAGAGAA CGAAATTCTT CAGACTCAAC TCGACACGGC 
AAAACGGGCT GCTGATCGGG AACGAACGAC TTTTCAGGTT GTCAAACGCA GCTTGGACGA 
GGCAAGAGCT GAACTTAAAT CGCTTCAAAA TCAAGACATC ATGGATAAAG ACCTCCCTGG 
CAATAATTCA GCCGAGCAGC TGAGGGATGC GGTGGAACAA CTTACTTTGT TAAGGGATAG 
CAATAAGCTT TTGCGAGATG ATGCAGATAA GCTGCAGTCT AATTTGACCG CAACACAGAA 
TGATCTCAAC GCGTTGAAGT CATCAAGGAA GCCTGCTGAG AAAGTTCAAC GCGAGCTCGA 
AGCCCGCATT GCGTCAGCTG AAGCCGAGAA AGAGAGTTTG AATCGCGACT TAGCTGCATG 
GAAGTCAAGA GTTGAAAGTC TCCTTTCCAA ATTCAATCAG ATTGATCCGG AAGAGTATGA 
GAAGGTTCTA AGACAAGTCG AAGAATTGAC GAAGGAGAAG GAGTCTCTGA CTGCATGGAA 
GAAGACAACA GAAGCGGAAA ACACACGAAT CAGAGAGATA TGCCGTAATC TCAAGAAGCA 
TATCAGCGAA TTGAAGAAAA CGATAGAGGA ACAGAAAAAA GATATAGATA AGCTCACGAC 
GGAAAAGGCT ACCCTCACAA CCAAGTCTAC AGAAGGAACT TCAGCTGCGA AGGAGCGAGA 
TGAGCTTAAG GGAAAACTGT CCCAGGCCGA GAAAGACACA GCTTCCACGA AGACGGAGTT 
GGATGGCGCA AACCATCAAA ATGAGATCTT GAGAGAGAGG ATGCGCCAAA TGGTAAAGAC 
GAGCAATGAG CTGCGGAAGA AAGAGAGGGA GCTGGTAGGA CAGCTCGCCG AAGCAAAATC 
TGCAACCCAA ACAGACTCCA TTCAAGACAA ATTAGGGAAA CCGTCTGAAA ATGCTTCGGA 
AAAACGTACG TTGGCGTCTT CGAAGATAGG CATTTCGACG CCTACCTTCT CTGCAACAAC 
ACCAGAGTCG ACTCAGAGGA CCGCAGGTTT GGTGGATGTA AGAGCACCTC AGATTCTTCC 
GACTATTCCG ACTAATGGAT TTAGGTTTGG ACCTAGTACC AAGCCGAAAC CGAAGTCTCC 
GATGGCTGTG TCCGAAGACG TACTCCAGGC AAAATCGGAG GAAAAGATCG AAACACGGGG 
AGCTTCCGAA CTAAAAGAGC CGACTTCCGT TTTTAGCGAG AAAGCCCCAG AGTTTGTGCC 
ACACTCGCAA ATGTCAACAA AAACGGAGAC AAATATTTCA TCTACGAGCG GAAGCTCACC 
TCTACAAAGC GGTGGTGACG TAGCCGACGC AAAACAACGA AGCTCAGGAG AGCTGGCTAC 
GACGACGCAT GCTACACCGA GTGAGAGTCA AGAATTATCG ATGAAAAAAG AAAAGCTTTT 
AGAGAAGAAA CGACTACTGG CAGACGCTAA GAAACGAAAA ATCCAGGCAG AAGCGGAGGC 
AAGAAAGACC GACACTGACG GACTGCAACA GGTAGCAAAA AAGCCAAAGA CCGAAGACAC 
TGAGAAAGAA TCGAGACTGA TTGGAGCAGA AGTGGGAGAC CGCACTCTGA CGGCTGGTAC 
AATGAGCGAG CAAGAGACCA GTAATTCAGC AGAAGTTTTG CTAGAAGCAG ACAAAACCGA 
GTCGGAACTT GTTGAAGTTG AGAATCTCGA CAACGAAGAA CCCTCGAAAA GCGAAATAGC 
TGAAAATGAG ACCGAACCAG CATTTAAGCC TTCATGTTTT GGAAGCGGAT CGACTGCTAC 
GACAAGCCCA TTTACGAAGA GCAATCCTGC CACGCCTTTC GGCCGATCGG ACGCTTTTGG 
TCAATCGGCA ACCGTCCTAC CCGGTGCCCC AACTACATTC GGGGTCACGT CATCCACCGT 
TCAGTCTTCA TCTGGTTTTG GGGAGGCATT TTTGAGCCAA ATGAAGCCTC CAGGAGGTTC 
TGCTACACCG CCCAGCTTTT CCTTTGGATC TTCCGAGATT CCCGGCCAGC AATTCCAGGC 
GTCAGCTTCT GTATTCGGTT CTTTCGGCGG CAAATCAACG CTTGGGAGTC TTGCCGGTAG 
CAAAGAACCG TCAATGGCAG CTTTTCCATT CGCTAGCCAA CCAGCTGTAC AAGAAAACAA 
GGAACAGAAC GATGACGCCA AGGATGCGAC CGAATTAGAG CAAACGGAAG AGGACGTTGT 
GAGGTAGCAC CTTATTTGCT GTTGCTTCTG CTTCGCCGGG GGCGTTCCTA AGGACGGTAG 
TACACCTTTT CTCCTTGTGG CAATCCTCCT TCGGAGTACT CACGCCATAG GAGATGTATA 
TCCTGTCTAG GACTAACAGT AATTTTACGA AGTCAGACCA AAGTACTATA ATGCACGAGT 
TTTATGTTCT CGTTATTTGG CTGCCTATAT ATAACATTTA CTTCCTTTCC ATTCTGGCAG 
CATTGGGCTC GCCTGCCTGG CTCTCGAAAG CCCCATTTCC AAAAGCCTCC AGACCTCGAA 
TAG 

 

Protein sequence

MSSPSDETIA GPPSSPTTED AGTQARKASA ALTSKVMLEE LERQYMQIKG ERDDLQQELT 
AAEEKFKTLN ESLTSNQALE VENAARQHEL RVAQERVKAL EEEQTATKER TDRAQAESDR 
LREEIARLAG SNRELSENIA TFEVQSKLSE SQAIPLFHEK QRLQTELDSL QAHANWLEQE 
LTAKSQDYQK LQRESRDRSI QLQLQLDQTI NEKEAFEARL DELHKMERRL QDKVEELSHD 
LLTGKQAMTD LQESTEIEIR EERRLVQLQK THLDRWEHRY NDVVRENESL KKAATEAMET 
SRSELLQTSE ALENKYKDLL REQAAEYEEK LKSNRLEAGP VRLALPAPPA AVATDYEDDV 
PLNLTDLYTR LEETKATLRR ETARADRAEL LNERIQKDIA AKAPLLNRQR EEYDFALDQI 
QNYQRRLEQA LNEVDNARED SKETRRDANR LQKLLSERTS ESKELAKQVQ ALLVTRAGGQ 
VGEEIPTSIV EIQNQNQRLL AEHRRLTETV RELESKLESD TLKAKLDAVE AELADLREDR 
QRQETAVERI VQQRDLYRAI LSKQDANVLG SESEQLSAME IAKQQSERYK ALDQKSKTLA 
SDLAAARGEI DRMGRERESM VERLARYEAH SAEMKAAVDT LERELLSARG DAARSNSESL 
YHRERAERVE ESLQRARDEI SMIGSSKAEL QRINTDLQQR VDIVRSESSR VATEVRQAEM 
KARLAETQVE TAKASESRMA EEVNQLRGEV SRQGSIIESI RRIEASLSAK SGSEREVLKS 
ELEKLSQVHK SEQTSFNTKI ENLNARIQEM DSRVVAANDS KDKFQSELSS VKDELNAVTA 
ERQELNLKAR RLEAQLRAAK KKLGEGDDLD DVEVALQARI EHLTNQLEET KSELANSKKQ 
ADTYQLISKN AESALAELSQ ATETMKATNE SEVLELNGRL EKLQKENASK QEIVLDLTKD 
LLSQRGEQEK VESILKSEIE SLKSEMKTRE QDSESSAAGT AALKLDLDAM RTEVATAQGN 
YERELQLHSQ ARTALREARE QAQEETRLRH IAEEKTDASA REFDQQKNVW EQEKLSANEN 
AKMIEESLKE AREQNRVLHM QLESLGAMVE ESQMSRAVAA SEIPEPGNSS EQMNLQKMLS 
ELREILKFVR SENEILQTQL DTAKRAADRE RTTFQVVKRS LDEARAELKS LQNQDIMDKD 
LPGNNSAEQL RDAVEQLTLL RDSNKLLRDD ADKLQSNLTA TQNDLNALKS SRKPAEKVQR 
ELEARIASAE AEKESLNRDL AAWKSRVESL LSKFNQIDPE EYEKVLRQVE ELTKEKESLT 
AWKKTTEAEN TRIREICRNL KKHISELKKT IEEQKKDIDK LTTEKATLTT KSTEGTSAAK 
ERDELKGKLS QAEKDTASTK TELDGANHQN EILRERMRQM VKTSNELRKK ERELVGQLAE 
AKSATQTDSI QDKLGKPSEN ASEKRTLASS KIGISTPTFS ATTPESTQRT AGLVDVRAPQ 
ILPTIPTNGF RFGPSTKPKP KSPMAVSEDV LQAKSEEKIE TRGASELKEP TSVFSEKAPE 
FVPHSQMSTK TETNISSTSG SSPLQSGGDV ADAKQRSSGE LATTTHATPS ESQELSMKKE 
KLLEKKRLLA DAKKRKIQAE AEARKTDTDG LQQVAKKPKT EDTEKESRLI GAEVGDRTLT 
AGTMSEQETS NSAEVLLEAD KTESELVEVE NLDNEEPSKS EIAENETEPA FKPSCFGSGS 
TATTSPFTKS NPATPFGRSD AFGQSATVLP GAPTTFGVTS STVQSSSGFG EAFLSQMKPP 
GGSATPPSFS FGSSEIPGQQ FQASASVFGS FGGKSTLGSL AGSKEPSMAA FPFASQPAVQ 
ENKEQNDDAK DATELEQTEE DVHWARLPGS RKPHFQKPPD LE