Gene PHATRDRAFT_35520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35520 
Symbol 
ID7200891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp99921 
End bp100448 
Gene Length528 bp 
Protein Length175 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180175 
Protein GI219118817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CTTCCGTCGC GTACGTGGCC GCACTATGGC CAGCGTCTAC AGTGCTGGCG 
CTGGACTCTG ATACAGTACC CCTTCGTGGT GCCCCCCGGT CCCCCGATGA GACGCACAGT
CTCCGCAGAA CCTTGACTGC GCCGAAGAAT ACCCCAGCCG TGGAAAACCG TCGGGACCTT
TACTTTGCGA GTCCAGAAAT AGCGCAGCAG CCTACCAATA GCAAGGGGAC CGGCGAGGGA
GAAGACAAAC CCAATAGAAT GTACCGAGGC AGTTTCAATT CTCCTTATGA TGGTCGCTCC
AAAGCAAAAT ACAGTGGCAC TTTCGCCTCT CCCTATGCTG ATCGATCCAG TTTCGGGGAA
GAAGGCGCTA CCAACACTCC TCAGACGGCT GCACCCACAA TCGAAAAGCA AGACGAATTG
GATGCTCCCG ATCTTGGTCA AACTCCTCCG AAGGAGGAAT ACATGTTTCA CTCTTACTTC
GGAAATAGAT CCAGTATTGA AGAGGGAGCC ATCAATCACT CTCCTTAG
 
Protein sequence
MKVTSVAYVA ALWPASTVLA LDSDTVPLRG APRSPDETHS LRRTLTAPKN TPAVENRRDL 
YFASPEIAQQ PTNSKGTGEG EDKPNRMYRG SFNSPYDGRS KAKYSGTFAS PYADRSSFGE
EGATNTPQTA APTIEKQDEL DAPDLGQTPP KEEYMFHSYF GNRSSIEEGA INHSP