| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35519 |
|---|
| Symbol | |
|---|
| ID | 7200772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 98594 |
|---|
| End bp | 99450 |
|---|
| Gene Length | 857 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180174 |
|---|
| Protein GI | 219118815 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAC CGAAGCCACA AACCGAGGAG CTGGAGGTTC AATGGATCGA ATCCAAATGG
TTGCAACAGC AGGAAGGCGA GAACACCCGA GAGGCCGATG AGGAAGACAT TCCCGCCGTA
GGGGATTTAT TTGCCGACCC GGATCCATTG GAGTCGTTTC GGTTTGACTG GGATACACTT
GAAGGGAAAC ATATTGCTAT AGAACTCACG GGACACAAGG CAGAATTGGG GCAAACGCTG
AATTCGACTG GTTTGACGTT ATGGCGCGCG TCCGAGCTAC TCTGTGAATA CCTTGTTAAA
CATCCAGAGT GGGTAGCGAC TAAGGATGTT TTGGAGGTAC GGACAGCAAG AAGCTTGATG
GAGTGTGAAT CTCGTAGCTA ATTCTTTGTT CTCAGCGCCA ATTTGCTTTT GCTCCACAGC
TGGGTTCTGG CTTGGGCTTG GTGGGGCTCT TGGTGCACCA CTTAGGAGCA GCGCGCACAT
CTTTGACGGA TGGCGACACG GATACGTTAT CAAATCTACG AGAAAATGTG CAAAGGAATG
GAGCCGACAC TGATTGTGGT AGACACGTAT CATGTCGACA ATTGGTTTGG GGCGAAAAGC
TAGAGTCCTT TCAAACCTCG TACGGTTCAT TCGACACCAT TGTCGGTTCC GATATTATTT
ACGTGGAACA GATCCTGGAT CCCTTGTGGA CAACCGTCGA CTTACTTCTC CGACCCGCTG
GAACCTTCTT ACTATCCTAC GCTCGCCGGA ACGTTTCGAT CGATTTAGTA CTGAGGAAGG
CTACCGAGTA CGGCTTTGAA TGGACGACTC CGGAGATGTC CGAAGGCGTT TTTGTTTTTG
TGCGCACGAG CATTTGA
|
|---|
| Protein sequence | MASPKPQTEE LEVQWIESKW LQQQEGENTR EADEEDIPAV GDLFADPDPL ESFRFDWDTL
EGKHIAIELT GHKAELGQTL NSTGLTLWRA SELLCEYLVK HPEWVATKDV LELGSGLGLV
GLLVHHLGAA RTSLTDGDTD TLSNLRENVQ RNGADTDCGR HVSCRQLVWG EKLESFQTSY
GSFDTIVGSD IIYVEQILDP LWTTVDLLLR PAGTFLLSYA RRNVSIDLVL RKATEYGFEW
TTPEMSEGVF VFVRTSI
|
|---|
| |