Gene PHATRDRAFT_35507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35507 
Symbol 
ID7200886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand- 
Start bp72372 
End bp73112 
Gene Length741 bp 
Protein Length246 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180170 
Protein GI219118807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.965868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CTTTCCTTTT TCTTAGTTGT CTATGTGCTT TGACCCTCCA AGAGTCTTGG 
GCGAGAGGGT TCTTGTCGAA AGATTTTCGA AAGAAACTGC GCCGCCATTT CGAAAGTGCA 
TCCCCAGCCG ATGGACCCGA AGCCATTGAA AATTCCACAA GTGGCCAAGA TGGCAATGTG 
AGACCAGGTT TGGTGCCATC TTCTTCCGGA GAGGACGGAC CTGTAAATCA CACGCCTTGC 
AATCGCGGAA TGGCCAACAT TCCCTGTCTG GCGGATGTGT CGGAAGCCGG AGGCCTAAAC 
CGCAGTGTCA CGGATCTGTA TGAGGATGGT GCCAAGGTTG GGGTCCAAGC CGAAACCTGG 
TCTACCACAA GAGACGCCAA TGTAGCGTAC TGGCTTGAGA ATCATATCAA CCAAATGAGC 
GAGCGCATGG CGACGCGCGG AGTGCGTAAA TGGGACCCTG TATTTCAAGC ATTCTACGTC 
CACCACAACG GATTCCACAT CACCTGCCAC CCAATTGGAG AATACGACGA GGCAGATATG 
GAAGACGATC GCGAGGGAGT TCGGTGTGAA ATCAAGCTTA CGGAAGATGG CTTAGATGAC 
CCCTGCGCCT TGGATTTGAT TGAGGCACAC GCTGATCTAG TAAGCCAGTT TGCCGATCCA 
AATGCCGTTC GACAGGCAAT GGCAGCCTCG CACGATGCAC CCGATTCTTG CCGTGGAGTT 
GCTCGTGGTC TACTTTCGTA G
 
Protein sequence
MKIAFLFLSC LCALTLQESW ARGFLSKDFR KKLRRHFESA SPADGPEAIE NSTSGQDGNV 
RPGLVPSSSG EDGPVNHTPC NRGMANIPCL ADVSEAGGLN RSVTDLYEDG AKVGVQAETW 
STTRDANVAY WLENHINQMS ERMATRGVRK WDPVFQAFYV HHNGFHITCH PIGEYDEADM 
EDDREGVRCE IKLTEDGLDD PCALDLIEAH ADLVSQFADP NAVRQAMAAS HDAPDSCRGV 
ARGLLS