| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35498 |
|---|
| Symbol | |
|---|
| ID | 7200760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 49287 |
|---|
| End bp | 50237 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180164 |
|---|
| Protein GI | 219118795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.487989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGG TACCTCGAGA GATTGTCTTG GAAGCCTACG CGTGCGAGAA CGACGATGGC
GACTACGACG AAGACGATGA CGAGTATGCG GGAGTCGATG CGGAGAACGA CAACAAGAAC
GTCAACGGTA GTCCCGAGGC GGCATGGAAA CGTTGGGGTT TAAGTCACGT TCGATTGTAC
AATCGCCTGT CGCCCGCTAT GGAAGATTCG TCGCTAGCTA TGGAAAATTC GTCGCCAGCT
ATGGAAAATT CGTCGCCAGC TATGGAAAAT TCGTCGCCAG CTATGGAAAA TTCGTCGCCA
CACCAGTCGC TTCCTCTTCC TAAGAGGACG ACAAGGACCG ATGTGGAAGC TGCTGTACAC
GCTGCCAACA GAACTGCCAA CGTATCCGCA ATATCAATCA ACGGCGGTGT CATTCTTAAA
ATAGACTCGG GCTCGTCCAA ATCACTCCGC TCCCGCCAAC GAGAGTGTAA ATTATCCGGT
GGGTGCAATC AGTGGCTAGG AATTGCGACG TGGAGTTTAG TATTGGCCCT CATTCAGTTC
CAGTTCGACA AAGTTGCGGC AGACTCCGGG GTCGAACCGG AAGACTTCTA CACCATCAGT
ACACTGGCAT TTCGCGAATC GTTGTGGACG TATGGTGCCA CTGTCAATAT TTGTCGCAGC
ATAGCTTTCA TGCTTCCGAC CAATCTATAC GTGGATTCCT GGGCTCCCGA ATTCGGTCTC
ACTGCTGTAC TCCTACTGGT GCTCACGGAA CGACCCTTTA CGTCCTACGT GGTCCTTCTT
GTTGCCATGA TTGCCTTGAA CGTTTGTATT GCCGCTAGTT GCATTGGTTT TCTCGTCACG
TCCGTGTATG GACCCGGTAC GCAACTGGAT CCACCCACAA GCGCCTTTGG TGACACAGGC
ATTCCTCCCG AAGAAATCTC CTCTCTGGAA TCATCACTGG AACTCTTGTA G
|
|---|
| Protein sequence | MMTVPREIVL EAYACENDDG DYDEDDDEYA GVDAENDNKN VNGSPEAAWK RWGLSHVRLY
NRLSPAMEDS SLAMENSSPA MENSSPAMEN SSPAMENSSP HQSLPLPKRT TRTDVEAAVH
AANRTANVSA ISINGGVILK IDSGSSKSLR SRQRECKLSG GCNQWLGIAT WSLVLALIQF
QFDKVAADSG VEPEDFYTIS TLAFRESLWT YGATVNICRS IAFMLPTNLY VDSWAPEFGL
TAVLLLVLTE RPFTSYVVLL VAMIALNVCI AASCIGFLVT SVYGPGTQLD PPTSAFGDTG
IPPEEISSLE SSLELL
|
|---|
| |